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Aliases for LOC105369540 Gene
Data sources for LOC105369540 Gene:
RNA type for LOC105369540 Gene
ncRNA
Aliases for LOC105369540 Gene
- Uncharacterized LOC105369540 (NCBI Entrez Gene)
External Ids for LOC105369540 Gene
- NCBI Entrez Gene: 105369540
Previous GeneCards Identifiers for LOC105369540 Gene
- GC11U902715
Summaries for LOC105369540 Gene
GeneCards Summary for LOC105369540 Gene
LOC105369540 (Uncharacterized LOC105369540) is an RNA Gene, and is affiliated with the ncRNA class.
Additional gene information for LOC105369540 Gene
No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for LOC105369540 Gene
Genomics for LOC105369540 Gene
GeneHancer (GH) Regulatory Elements Pubs
Promoters and enhancers for LOC105369540 Gene
| GeneHancer (GH) Identifier | GH Type | GH Score |
GH Sources | Gene Association Score | Total Score | TSS distance (kb) | Number of Genes Away | Size (kb) | Transcription Factor Binding Sites |
Gene Targets |
|---|---|---|---|---|---|---|---|---|---|---|
| GH11J123201 | Enhancer | 1 | Ensembl ENCODE CraniofacialAtlas dbSUPER | 250.7 | -1.2 | -1192 | 2.7 | JUND ZIC2 MAX RFX1 TRIM28 CHD2 MNT NR2F2 CEBPB | HSALNG0087814 LOC105369540 CLMP lnc-GRAMD1B-5 ENSG00000254710 GRAMD1B | |
| GH11J123206 | Enhancer | 0.9 | Ensembl ENCODE CraniofacialAtlas dbSUPER | 0.7 | +3.2 | 3152 | 1 | RFX1 TRIM28 EZH2 | LOC105369539 RF00017-960 HSALNG0087814 LOC105369540 lnc-CLMP-1 CLMP ENSG00000254710 GRAMD1B |
- Elite GeneHancer and/or Elite GeneHancer-gene association
Download GeneHancer data from 2017 publication |
Request up-to-date GeneHancer data (full dataset)
GeneHancers around LOC105369540 on the GeneHancer Hub at the UCSC Golden Path
Genomic Locations for LOC105369540 Gene
Latest Assembly
- chr11:123,204,038-123,207,719
- (GRCh38/hg38)
- Size:
- 3,682 bases
- Orientation:
- Plus strand
Genomic View for LOC105369540 Gene
Genes around LOC105369540 on UCSC Golden Path with GeneCards custom track
LOC105369540 in the GeneCaRNA (GeneCards ncRNA compendium) hub on the UCSC Golden Path
- Cytogenetic band:
-
- 11q24.1 by Entrez Gene
LOC105369540 Gene in genomic location: bands according to
Ensembl, locations according to GeneLoc
(and/or Entrez Gene and/or Ensembl if different)
Genomic Neighborhood
• Exon Structure
• Gene Density
RefSeq DNA sequence for LOC105369540 Gene
Proteins for LOC105369540 Gene
Post-translational modifications for LOC105369540 Gene
No Post-translational modifications
No data available for DME Specific Peptides for LOC105369540 Gene
Domains & Families for LOC105369540 Gene
No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for LOC105369540 Gene
Function for LOC105369540 Gene
CRISPR products for research
Inhibitory RNAs for research
Clone products for research
Cell Lines for research
No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC105369540 Gene
Localization for LOC105369540 Gene
No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC105369540 Gene
Transcripts for LOC105369540 Gene
LOC105369540 in the GeneCaRNA (GeneCards ncRNA compendium) hub on the UCSC Golden Path
CRISPR products for research
Inhibitory RNAs for research
Clone products for research
Relevant External Links for LOC105369540 Gene
- GeneLoc Exon Structure for
- LOC105369540
No data available for mRNA/cDNA for LOC105369540 Gene
Expression for LOC105369540 Gene
No Expression Related Data Available
No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC105369540 Gene
Orthologs for LOC105369540 Gene
No data available for Orthologs and Evolution for LOC105369540 Gene
Paralogs for LOC105369540 Gene
No data available for Paralogs for LOC105369540 Gene
Variants for LOC105369540 Gene
All consequence types are included: molecular consequences (e.g. missense, synonymous), and location-based (e.g. intron, upstream).
No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC105369540 Gene
Disorders for LOC105369540 Gene
No disorders were found for LOC105369540 Gene.
No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC105369540 Gene
Publications for LOC105369540 Gene
No publications were found for LOC105369540 Gene.
No data available for Mastermind for LOC105369540 Gene
Products for LOC105369540 Gene
- Browse OriGene Antibodies
- Custom Antibody Services
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- Custom Assay Services
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- Origene Custom Protein Services for LOC105369540
- Browse OriGene Inhibitory RNA Products For LOC105369540
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- Browse CRISPR knockouts for LOC105369540
- Custom cloning services - gene synthesis, subcloning, mutagenesis, variant library, vector shuttling
- Browse OriGene miRNA Products For LOC105369540
- Browse Sino Biological cDNA Clones
- Browse Sino Biological Recombinant Proteins
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- High-throughput Antibody Production Service
- Protein Production Service
- Epitope Tag Antibodies & Reporter Protein Antibodies
- Lentiviral ORF Clones
- Browse GeneCopoeia Cell Lines
- Search GeneCopoeia for knockout CRISPR/Cas9 clones, lentivirus, and/or AAV products for LOC105369540
- Search GeneCopoeia for ORF cDNA, lentivirus, AAV viral particles, and/or promoter clone products for LOC105369540
- Search GeneCopoeia for miRNA 3'UTR Target clone products for LOC105369540
- Search GeneCopoeia for shRNA, lentivirus, and/or AAV clone products for LOC105369540
Sources for LOC105369540 Gene
- (1) GeneCards
- (2) HGNC
- (3) NCBI Entrez Gene
- (4) UniProtKB/Swiss-Prot
- (5) Ensembl
- (6) OMIM® (Updated: 05-Apr-2021)
- (7) GeneLoc
- (8) Gene Wiki
- (9) UCSC
- (10) PhosphoSitePlus
- (11) Cell Signaling Technology
- (12) GO
- (13) UniProtKB/TrEMBL
- (14) InterPro
- (15) Blocks
- (16) MGI
- (17) IUBMB
- (18) KEGG
- (19) MINT
- (20) STRING
- (21) IntAct
- (22) Novoseek
- (23) PharmGKB
- (24) DrugBank
- (25) HMDB
- (26) ASD
- (27) SAGE
- (28) SOURCE
- (29) HomoloGene
- (30) PanEnsembl
- (31) euGenes
- (32) SGD
- (33) FlyBase
- (34) WormBase
- (35) Pseudogene
- (36) DGV
- (37) dbSNP
- (38) GenAtlas
- (39) HGMD
- (40) GAD
- (41) BGMUT
- (42) HuGE
- (43) Atlas
- (44) GenBank
- (45) HORDE
- (46) HUGE
- (47) IMGT
- (48) Leiden
- (49) miRBase
- (50) DME
- (51) OriGene
- (52) PubMed
- (53) R&D Systems
- (54) Tocris
- (55) Abcam
- (56) Novus Biologicals
- (57) ProSpec
- (58) Sino Biological
- (59) GenScript
- (60) Qiagen
- (61) OCA
- (62) Proteopedia
- (63) MOPED
- (64) neXtProt
- (65) Reactome
- (66) GeneGo (Thomson Reuters)
- (67) DISEASES
- (68) SIMAP
- (69) GenomeRNAi
- (70) LifeMap
- (71) miRTarBase
- (72) MalaCards
- (73) Invitrogen
- (74) BitterDB
- (75) ESI-BIO
- (76) RefSeq
- (77) BioSystems
- (78) MaxQB
- (79) IUPHAR
- (80) BioGPS
- (81) Illumina
- (82) COMPARTMENTS
- (83) HOMER
- (84) PaxDb
- (85) ApexBio
- (86) Addgene
- (87) antibodies-online
- (88) CYP
- (89) NONCODE
- (90) TreeFam
- (91) PathCards
- (92) GeneReviews
- (93) GeneTex
- (94) Taconic Biosciences
- (95) GTEx
- (96) ProteomicsDB
- (97) SCBT
- (98) DGIdb
- (99) ClinicalTrials
- (100) RVIS
- (101) SIGNOR
- (102) diseasecard
- (103) NIH Rare Diseases
- (104) Orphanet
- (105) UMLS
- (106) GTR
- (107) Disease Ontology
- (108) MedlinePlus Genetics
- (109) MeSH
- (110) MedlinePlus
- (111) CDC
- (112) NINDS
- (113) NCBI Bookshelf
- (114) ClinVar
- (115) Gene Damage Index
- (116) HPO
- (117) UDN
- (118) VISTA
- (119) FANTOM5
- (120) ENCODE
- (121) ProSci
- (122) Horizon
- (123) The Signaling Pathways Project (SPP)
- (124) IID
- (125) VectorBuilder
- (126) SNPedia
- (127) BRCA Exchange
- (128) CIViC
- (129) ProteoGenix
- (130) dbSUPER
- (131) TISSUES
- (132) Gene ORGANizer
- (133) abm
- (134) Human Protein Atlas
- (135) GWAS Catalog
- (136) Monarch Initiative
- (137) DataMed
- (138) HumanCyc
- (139) UCNEbase
- (140) EPDnew
- (141) Applied Biosystems
- (142) GlyConnect
- (143) Aminode
- (144) GeneCopoeia
- (145) GPS-Prot
- (146) RNAcentral
- (147) LncRNADisease
- (148) LOVD
- (149) miR2Disease
- (150) DiseaseEnhancer
- (151) Boster Bio
- (152) Biorbyt
- (153) Biocompare
- (154) Mastermind
- (155) CTD^2 Dashboard
- (156) CraniofacialAtlas
- (157) GeneImprint
- (158) Synthego
- (159) ENA
- (160) GtRNAdb
- (161) LncBase
- (162) LncBook
- (163) LNCipedia
- (164) Modomics
- (165) PDBe
- (166) Rfam
- (167) SILVA
- (168) snOPY
- (169) SRPDB
- (170) GENCODE
- (171) TarBase
- (172) Open Targets Platform
- (173) 5SRRNADB
- (174) snoDB
- (175) MirGeneDB
- (176) Alliance of Genome Resources