Aliases for LOC105369540 Gene
Subcategory (RNA class) for LOC105369540 Gene
ncRNA
Quality Score for this RNA gene is
13
Aliases for LOC105369540 Gene
- Uncharacterized LOC105369540 3
External Ids for LOC105369540 Gene
- Entrez Gene: 105369540
Previous GeneCards Identifiers for LOC105369540 Gene
- GC11U902715
Summaries for LOC105369540 Gene
GeneCards Summary for LOC105369540 Gene
LOC105369540 (Uncharacterized LOC105369540) is an RNA Gene, and is affiliated with the ncRNA class.
Additional gene information for LOC105369540 Gene
No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for LOC105369540 Gene
Genomics for LOC105369540 Gene
GeneHancer (GH) Regulatory Elements for LOC105369540 Gene
Promoters and enhancers for LOC105369540 Gene
| GeneHancer (GH) Identifier | GH Type | GH Score |
GH Sources | Gene Association Score | Total Score | TSS distance (kb) | Number of Genes Away | Size (kb) | Transcription Factor Binding Sites |
Gene Targets |
|---|---|---|---|---|---|---|---|---|---|---|
| GH11J123201 | Enhancer | 0.7 | ENCODE dbSUPER | 600.7 | -1.7 | -1655 | 2.2 | RFX1 ZIC2 MNT NR2F2 MAX | LOC105369540 GC11P123195 ENSG00000254710 GC11M123201 | |
| GH11J123206 | Enhancer | 0.8 | Ensembl ENCODE dbSUPER | 0.7 | +3.1 | 3129 | 1.5 | RFX1 GATA3 | LOC105369539 LOC105369540 ENSG00000254710 GC11M123201 | |
| GH11J123197 | Enhancer | 0.7 | ENCODE dbSUPER | 0.4 | -6.3 | -6347 | 1.4 | CEBPB FOS EP300 ZFHX2 RCOR1 POLR2A | CLMP GC11P123195 LOC105369540 ENSG00000254710 |
- Elite GeneHancer and/or Elite GeneHancer-gene association
Download GeneHancer data from 2017 publication |
Request up-to-date GeneHancer data (full dataset)
GeneHancers around LOC105369540 on UCSC Golden Path with GeneCards custom track
Genomic Locations for LOC105369540 Gene
Genomic Locations for LOC105369540 Gene
- chr11:123,204,312-123,208,396
- (GRCh38/hg38)
- Size:
- 4,085 bases
- Orientation:
- Plus strand
Genomic View for LOC105369540 Gene
Genes around LOC105369540 on UCSC Golden Path with GeneCards custom track
- Cytogenetic band:
-
- 11q24.1 by Entrez Gene
LOC105369540 Gene in genomic location: bands according to
Ensembl, locations according to GeneLoc
(and/or Entrez Gene and/or Ensembl if different)
Genomic Neighborhood
• Exon Structure
• Gene Density
RefSeq DNA sequence for LOC105369540 Gene
Proteins for LOC105369540 Gene
Post-translational modifications for LOC105369540 Gene
No Post-translational modifications
Antibody Products
Protein Products
- Search Origene for Purified Proteins, MassSpec and Protein Over-expression Lysates for LOC105369540
- Origene Custom Protein Services for LOC105369540
No data available for DME Specific Peptides for LOC105369540 Gene
Domains & Families for LOC105369540 Gene
Graphical View of Domain Structure for InterPro Entry
No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for LOC105369540 Gene
Function for LOC105369540 Gene
Animal Model Products
- Taconic Biosciences: Generate A Custom CRISPR Mouse Model For Your Study
- Cyagen custom Knockout/knockin (KOKI) mouse models for LOC105369540
-
miRNA Products
Inhibitory RNA Products
Clone Products
No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC105369540 Gene
Localization for LOC105369540 Gene
No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC105369540 Gene
Transcripts for LOC105369540 Gene
miRNA Products
Inhibitory RNA Products
Clone Products
Relevant External Links for LOC105369540 Gene
- GeneLoc Exon Structure for
- LOC105369540
No data available for mRNA/cDNA for LOC105369540 Gene
Expression for LOC105369540 Gene
No Expression Related Data Available
Primer Products
No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC105369540 Gene
Orthologs for LOC105369540 Gene
No data available for Orthologs and Evolution for LOC105369540 Gene
Paralogs for LOC105369540 Gene
No data available for Paralogs for LOC105369540 Gene
Variants for LOC105369540 Gene
| SNP ID | Clin | Chr 11 pos | Variation | AA Info | Type |
|---|---|---|---|---|---|
| rs1000461814 | -- | 123,207,248(+) | A/C | non_coding_transcript_variant | |
| rs1000908603 | -- | 123,205,525(+) | T/C | intron_variant | |
| rs1001190628 | -- | 123,204,746(+) | G/A | intron_variant | |
| rs1001241641 | -- | 123,204,491(+) | C/T | non_coding_transcript_variant | |
| rs1001688052 | -- | 123,204,804(+) | T/G | intron_variant |
No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC105369540 Gene
Disorders for LOC105369540 Gene
No disorders were found for LOC105369540 Gene.
No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC105369540 Gene
Publications for LOC105369540 Gene
No publications were found for LOC105369540 Gene.
No data available for External Links for LOC105369540 Gene
Products for LOC105369540 Gene
- Browse OriGene Antibodies
- Custom Antibody Services
- Browse OriGene ELISA Kits
- Custom Assay Services
- Search Origene for Purified Proteins, MassSpec and Protein Over-expression Lysates for LOC105369540
- Origene Custom Protein Services for LOC105369540
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- Browse OriGene qPCR primer pairs and template standards
- Browse CRISPR knockouts for LOC105369540
- Custom cloning services - gene synthesis, subcloning, mutagenesis, variant library, vector shuttling
- Browse OriGene miRNA Products For LOC105369540
- Browse Sino Biological cDNA Clones
- Browse Sino Biological Recombinant Proteins
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- High-throughput Antibody Production Service
- Protein Production Service
- Epitope Tag Antibodies & Reporter Protein Antibodies
- Lentiviral ORF Clones
- Cyagen custom Knockout/knockin (KOKI) mouse models for LOC105369540
- Browse GeneCopoeia Cell Lines
- Search GeneCopoeia for knockout CRISPR/Cas9 clones, lentivirus, and/or AAV products for LOC105369540
- Search GeneCopoeia for ORF cDNA, lentivirus, AAV viral particles, and/or promoter clone products for LOC105369540
- Search GeneCopoeia for miRNA 3'UTR Target clone products for LOC105369540
- Search GeneCopoeia for shRNA, lentivirus, and/or AAV clone products for LOC105369540
Sources for LOC105369540 Gene
- (1) GeneCards
- (2) HGNC
- (3) EntrezGene
- (4) Swiss-Prot
- (5) Ensembl
- (6) OMIM
- (7) GeneLoc
- (8) Gene Wiki
- (9) UCSC
- (10) PhosphoSitePlus
- (11) Cell Signaling Technology
- (12) GO
- (13) TrEMBL
- (14) InterPro
- (15) ProtoNet
- (16) Blocks
- (17) MGI
- (18) IUBMB
- (19) KEGG
- (20) MINT
- (21) STRING
- (22) IntAct
- (23) Novoseek
- (24) PharmGKB
- (25) DrugBank
- (26) HMDB
- (27) UniGene
- (28) AceView
- (29) ASD
- (30) ECgene
- (31) GeneAnnot
- (32) CGAP SAGE
- (33) SOURCE
- (34) HomoloGene
- (35) PanEnsembl
- (36) euGenes
- (37) SGD
- (38) FlyBase
- (39) WormBase
- (40) Pseudogene
- (41) DGV
- (42) dbSNP
- (43) GenAtlas
- (44) HGMD
- (45) GAD
- (46) BGMUT
- (47) HuGE
- (48) Atlas
- (49) GenBank
- (50) H-invDB
- (51) HORDE
- (52) HUGE
- (53) IMGT
- (54) Leiden
- (55) miRBase
- (56) DME
- (57) OriGene
- (58) PubMed
- (59) R&D Systems
- (60) TGDB
- (61) Tocris
- (62) Abcam
- (63) Novus Biologicals
- (64) ProSpec
- (65) Sino Biological
- (66) GenScript
- (67) Qiagen
- (68) OCA
- (69) Proteopedia
- (70) MOPED
- (71) neXtProt
- (72) Reactome
- (73) GeneGo (Thomson Reuters)
- (74) fRNAdb
- (75) DISEASES
- (76) SIMAP
- (77) GenomeRNAi
- (78) LifeMap
- (79) miRTarBase
- (80) MalaCards
- (81) Invitrogen
- (82) BitterDB
- (83) ESI-BIO
- (84) RefSeq
- (85) BioSystems
- (86) MaxQB
- (87) IUPHAR
- (88) BioGPS
- (89) Illumina
- (90) COMPARTMENTS
- (91) HOMER
- (92) PaxDb
- (93) ApexBio
- (94) Addgene
- (95) antibodies-online
- (96) CYP
- (97) NONCODE
- (98) SwitchGear Genomics
- (99) TreeFam
- (100) PathCards
- (101) GeneReviews
- (102) GeneTex
- (103) Taconic Biosciences
- (104) GTEx
- (105) ProteomicsDB
- (106) SCBT
- (107) DGIdb
- (108) ClinicalTrials
- (109) FDA Approved Drugs
- (110) RVIS
- (111) SIGNOR
- (112) diseasecard
- (113) NIH Rare Diseases
- (114) Orphanet
- (115) UMLS
- (116) GTR
- (117) Disease Ontology
- (118) Genetics Home Reference
- (119) MeSH
- (120) MedlinePlus
- (121) CDC
- (122) NINDS
- (123) NCBI Bookshelf
- (124) ClinVar
- (125) Gene Damage Index
- (126) ViGene Biosciences
- (127) HPO
- (128) UDN
- (129) VISTA
- (130) FANTOM5
- (131) ENCODE
- (132) ProSci
- (133) Horizon
- (134) NURSA
- (135) IID
- (136) Cyagen
- (137) VectorBuilder
- (138) SNPedia
- (139) BRCA Exchange
- (140) St John's Lab
- (141) CIViC
- (142) ProteoGenix
- (143) dbSUPER
- (144) TISSUES
- (145) Gene ORGANizer
- (146) abm
- (147) CrownBio
- (148) Human Protein Atlas
- (149) GWAS Catalog
- (150) Monarch Initiative
- (151) DataMed
- (152) HumanCyc
- (153) genomics-online
- (154) UCNEbase
- (155) EPDnew
- (156) Applied Biosystems
- (157) GlyConnect
- (158) Aminode
- (159) GeneCopoeia
- (160) GPS-Prot
- (161) RNACentral
- (162) LncRNADisease
- (163) LOVD
- (164) miR2Disease
- (165) DiseaseEnhancer
- (166) Boster Bio
- (167) Biorbyt
- (168) Biocompare
- (169) Mastermind