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Aliases for LOC105369540 Gene
Summaries for LOC105369540 Gene
GeneCards Summary for LOC105369540 Gene
LOC105369540 (Uncharacterized LOC105369540) is an RNA Gene, and is affiliated with the ncRNA class.
Additional gene information for LOC105369540 Gene
No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for LOC105369540 Gene
Genomics for LOC105369540 Gene
GeneHancer (GH) Regulatory Elements Pubs
Promoters and enhancers for LOC105369540 Gene
| GeneHancer (GH) Identifier | GH Type | GH Score |
GH Sources | Gene Association Score | Total Score | TSS distance (kb) | Number of Genes Away | Size (kb) | Transcription Factor Binding Sites |
Gene Targets |
|---|---|---|---|---|---|---|---|---|---|---|
| GH11J123201 | Enhancer | 0.9 | ENCODE CraniofacialAtlas dbSUPER | 600.7 | -1.4 | -1425 | 2.2 | RFX1 ZIC2 MNT NR2F2 TRIM28 SMARCA4 CHD2 MAX | LOC105369540 CLMP lnc-GRAMD1B-5 ENSG00000254710 GRAMD1B | |
| GH11J123206 | Enhancer | 1 | Ensembl ENCODE CraniofacialAtlas dbSUPER | 0.7 | +3.2 | 3152 | 1 | TEAD4 FOXA1 RFX1 GATA3 TRIM28 EZH2 | LOC105369539 RF00017-1057 LOC105369540 lnc-CLMP-1 CLMP ENSG00000254710 GRAMD1B | |
| GH11J123197 | Enhancer | 0.7 | ENCODE dbSUPER | 0.4 | -6.1 | -6073 | 1.4 | CEBPB FOS EP300 ZFHX2 BHLHE40 RCOR1 POLR2A NFE2L2 | CLMP lnc-GRAMD1B-5 ENSG00000254710 LOC105369540 GRAMD1B | |
| GH11J123207 | Enhancer | 0.3 | Ensembl dbSUPER | 0.7 | +2.3 | 2263 | 0.2 | LOC105369539 RF00017-1057 LOC105369540 CLMP ENSG00000254710 GRAMD1B | ||
| GH11J123200 | Enhancer | 0.2 | Ensembl | 0.7 | -3.0 | -3037 | 0.4 | LOC105369540 CLMP lnc-GRAMD1B-5 ENSG00000254710 GRAMD1B |
- Elite GeneHancer and/or Elite GeneHancer-gene association
Download GeneHancer data from 2017 publication |
Request up-to-date GeneHancer data (full dataset)
GeneHancers around LOC105369540 on the GeneHancer Hub at the UCSC Golden Path
Genomic Locations for LOC105369540 Gene
Genomic Locations for LOC105369540 Gene
- chr11:123,204,038-123,207,719
- (GRCh38/hg38)
- Size:
- 3,682 bases
- Orientation:
- Plus strand
Genomic View for LOC105369540 Gene
Genes around LOC105369540 on UCSC Golden Path with GeneCards custom track
LOC105369540 in the GeneCards ncRNA compendium hub on the UCSC Golden Path
- Cytogenetic band:
-
- 11q24.1 by Entrez Gene
LOC105369540 Gene in genomic location: bands according to
Ensembl, locations according to GeneLoc
(and/or Entrez Gene and/or Ensembl if different)
Genomic Neighborhood
• Exon Structure
• Gene Density
RefSeq DNA sequence for LOC105369540 Gene
Proteins for LOC105369540 Gene
Post-translational modifications for LOC105369540 Gene
No Post-translational modifications
Antibody Products
Protein Products
- Search Origene for Purified Proteins, MassSpec and Protein Over-expression Lysates for LOC105369540
- Origene Custom Protein Services for LOC105369540
No data available for DME Specific Peptides for LOC105369540 Gene
Domains & Families for LOC105369540 Gene
No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for LOC105369540 Gene
Function for LOC105369540 Gene
Animal Model Products
- Taconic Biosciences: Generate A Custom CRISPR Mouse Model For Your Study
miRNA Products
Inhibitory RNA Products
Clone Products
No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC105369540 Gene
Localization for LOC105369540 Gene
No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC105369540 Gene
Transcripts for LOC105369540 Gene
LOC105369540 in the GeneCards ncRNA compendium hub on the UCSC Golden Path
miRNA Products
Inhibitory RNA Products
Clone Products
Relevant External Links for LOC105369540 Gene
- GeneLoc Exon Structure for
- LOC105369540
No data available for mRNA/cDNA for LOC105369540 Gene
Expression for LOC105369540 Gene
No Expression Related Data Available
Primer Products
No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC105369540 Gene
Orthologs for LOC105369540 Gene
No data available for Orthologs and Evolution for LOC105369540 Gene
Paralogs for LOC105369540 Gene
No data available for Paralogs for LOC105369540 Gene
Variants for LOC105369540 Gene
No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC105369540 Gene
Disorders for LOC105369540 Gene
No disorders were found for LOC105369540 Gene.
No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC105369540 Gene
Publications for LOC105369540 Gene
No publications were found for LOC105369540 Gene.
No data available for Mastermind for LOC105369540 Gene
Products for LOC105369540 Gene
- Browse OriGene Antibodies
- Custom Antibody Services
- Browse OriGene ELISA Kits
- Custom Assay Services
- Search Origene for Purified Proteins, MassSpec and Protein Over-expression Lysates for LOC105369540
- Origene Custom Protein Services for LOC105369540
- Browse OriGene Inhibitory RNA Products For LOC105369540
- Browse OriGene qPCR primer pairs and template standards
- Browse CRISPR knockouts for LOC105369540
- Custom cloning services - gene synthesis, subcloning, mutagenesis, variant library, vector shuttling
- Browse OriGene miRNA Products For LOC105369540
- Browse Sino Biological cDNA Clones
- Browse Sino Biological Recombinant Proteins
- Browse Sino Biological Cell Lysates
- Browse Sino Biological Antibodies
- Browse Sino Biological Assays
- Browse ELISA Kits
- Browse CRO Services
- High-throughput Antibody Production Service
- Protein Production Service
- Epitope Tag Antibodies & Reporter Protein Antibodies
- Lentiviral ORF Clones
- Browse GeneCopoeia Cell Lines
- Search GeneCopoeia for knockout CRISPR/Cas9 clones, lentivirus, and/or AAV products for LOC105369540
- Search GeneCopoeia for ORF cDNA, lentivirus, AAV viral particles, and/or promoter clone products for LOC105369540
- Search GeneCopoeia for miRNA 3'UTR Target clone products for LOC105369540
- Search GeneCopoeia for shRNA, lentivirus, and/or AAV clone products for LOC105369540
Sources for LOC105369540 Gene
- (1) GeneCards
- (2) HGNC
- (3) NCBI Entrez Gene
- (4) UniProtKB/Swiss-Prot
- (5) Ensembl
- (6) OMIM
- (7) GeneLoc
- (8) Gene Wiki
- (9) UCSC
- (10) PhosphoSitePlus
- (11) Cell Signaling Technology
- (12) GO
- (13) UniProtKB/TrEMBL
- (14) InterPro
- (15) ProtoNet
- (16) Blocks
- (17) MGI
- (18) IUBMB
- (19) KEGG
- (20) MINT
- (21) STRING
- (22) IntAct
- (23) Novoseek
- (24) PharmGKB
- (25) DrugBank
- (26) HMDB
- (27) ASD
- (28) SAGE
- (29) SOURCE
- (30) HomoloGene
- (31) PanEnsembl
- (32) euGenes
- (33) SGD
- (34) FlyBase
- (35) WormBase
- (36) Pseudogene
- (37) DGV
- (38) dbSNP
- (39) GenAtlas
- (40) HGMD
- (41) GAD
- (42) BGMUT
- (43) HuGE
- (44) Atlas
- (45) GenBank
- (46) HORDE
- (47) HUGE
- (48) IMGT
- (49) Leiden
- (50) miRBase
- (51) DME
- (52) OriGene
- (53) PubMed
- (54) R&D Systems
- (55) TGDB
- (56) Tocris
- (57) Abcam
- (58) Novus Biologicals
- (59) ProSpec
- (60) Sino Biological
- (61) GenScript
- (62) Qiagen
- (63) OCA
- (64) Proteopedia
- (65) MOPED
- (66) neXtProt
- (67) Reactome
- (68) GeneGo (Thomson Reuters)
- (69) DISEASES
- (70) SIMAP
- (71) GenomeRNAi
- (72) LifeMap
- (73) miRTarBase
- (74) MalaCards
- (75) Invitrogen
- (76) BitterDB
- (77) ESI-BIO
- (78) RefSeq
- (79) BioSystems
- (80) MaxQB
- (81) IUPHAR
- (82) BioGPS
- (83) Illumina
- (84) COMPARTMENTS
- (85) HOMER
- (86) PaxDb
- (87) ApexBio
- (88) Addgene
- (89) antibodies-online
- (90) CYP
- (91) NONCODE
- (92) TreeFam
- (93) PathCards
- (94) GeneReviews
- (95) GeneTex
- (96) Taconic Biosciences
- (97) GTEx
- (98) ProteomicsDB
- (99) SCBT
- (100) DGIdb
- (101) ClinicalTrials
- (102) RVIS
- (103) SIGNOR
- (104) diseasecard
- (105) NIH Rare Diseases
- (106) Orphanet
- (107) UMLS
- (108) GTR
- (109) Disease Ontology
- (110) Genetics Home Reference
- (111) MeSH
- (112) MedlinePlus
- (113) CDC
- (114) NINDS
- (115) NCBI Bookshelf
- (116) ClinVar
- (117) Gene Damage Index
- (118) HPO
- (119) UDN
- (120) VISTA
- (121) FANTOM5
- (122) ENCODE
- (123) ProSci
- (124) Horizon
- (125) The Signaling Pathways Project (SPP)
- (126) IID
- (127) VectorBuilder
- (128) SNPedia
- (129) BRCA Exchange
- (130) CIViC
- (131) ProteoGenix
- (132) dbSUPER
- (133) TISSUES
- (134) Gene ORGANizer
- (135) abm
- (136) Human Protein Atlas
- (137) GWAS Catalog
- (138) Monarch Initiative
- (139) DataMed
- (140) HumanCyc
- (141) UCNEbase
- (142) EPDnew
- (143) Applied Biosystems
- (144) GlyConnect
- (145) Aminode
- (146) GeneCopoeia
- (147) GPS-Prot
- (148) RNACentral
- (149) LncRNADisease
- (150) LOVD
- (151) miR2Disease
- (152) DiseaseEnhancer
- (153) Boster Bio
- (154) Biorbyt
- (155) Biocompare
- (156) Mastermind
- (157) CTD^2 Dashboard
- (158) CraniofacialAtlas
- (159) GeneImprint
- (160) Synthego
- (161) ENA
- (162) GtRNAdb
- (163) LncBase
- (164) LncBook
- (165) LNCipedia
- (166) Modomics
- (167) PDBe
- (168) Rfam
- (169) SILVA
- (170) snOPY
- (171) SRPDB
- (172) GENCODE
- (173) TarBase
- (174) Signalway Antibody
- (175) Open Targets Platform
- (176) 5SRRNADB
- (177) snoDB
- (178) MirGeneDB