Aliases for LOC105369536 Gene

Data sources for LOC105369536 Gene:

RNA type for LOC105369536 Gene

ncRNA

Aliases for LOC105369536 Gene

External Ids for LOC105369536 Gene

Previous GeneCards Identifiers for LOC105369536 Gene

  • GC11U902340

Summaries for LOC105369536 Gene

GeneCards Summary for LOC105369536 Gene

LOC105369536 (Uncharacterized LOC105369536) is an RNA Gene, and is affiliated with the ncRNA class.

Additional gene information for LOC105369536 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for LOC105369536 Gene

Genomics for LOC105369536 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for LOC105369536 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH11J121446 Promoter/Enhancer 2.5 EPDnew FANTOM5 Ensembl ENCODE CraniofacialAtlas dbSUPER 250.7 +0.5 519 11.3 BCLAF1 SP1 ZNF207 ZNF600 SSRP1 POLR2A CEBPA ATF3 ZIC2 YY1 SORL1 ENSG00000246790 HSALNG0087741-002 LOC105369536 TBCEL SC5D BLID
GH11J121447 Promoter/Enhancer 0.9 Ensembl dbSUPER 0.4 +6.9 6912 0.2 ZNF207 ASH2L ELF1 IKZF1 RB1 NR2F1 KLF5 ZNF687 MTA2 IKZF2 HSALNG0087741-001 ENSG00000246790 SORL1 LOC105369536 SC5D
GH11J121444 Enhancer 0.6 dbSUPER 0.4 +7.5 7525 0.7 EBF1 SMARCA5 ELF1 IKZF1 HDGF MTA3 ZNF217 TARDBP ZNF687 IKZF2 HSALNG0087741-001 ENSG00000246790 SORL1 LOC105369536 lnc-BLID-8 ENSG00000271022 SC5D
GH11J121441 Enhancer 0.2 dbSUPER 0.4 +11.3 11306 1.2 SC5D HSALNG0087741-001 ENSG00000246790 ENSG00000271022 lnc-BLID-8 LOC105369536 SORL1
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LOC105369536 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for LOC105369536 Gene

Latest Assembly
chr11:121,439,082-121,453,013
(GRCh38/hg38)
Size:
13,932 bases
Orientation:
Minus strand

Genomic View for LOC105369536 Gene

Genes around LOC105369536 on UCSC Golden Path with GeneCards custom track
LOC105369536 in the GeneCaRNA (GeneCards ncRNA compendium) hub on the UCSC Golden Path

Cytogenetic band:
LOC105369536 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC105369536 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC105369536 Gene

Proteins for LOC105369536 Gene

Post-translational modifications for LOC105369536 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC105369536 Gene

Domains & Families for LOC105369536 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for LOC105369536 Gene

Function for LOC105369536 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC105369536 Gene

Localization for LOC105369536 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC105369536 Gene

Pathways & Interactions for LOC105369536 Gene

PathCards logo

SuperPathways for LOC105369536 Gene

No Data Available

Gene Ontology (GO) - Biological Process for LOC105369536 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for LOC105369536 Gene

Drugs & Compounds for LOC105369536 Gene

No Compound Related Data Available

Transcripts for LOC105369536 Gene

LOC105369536 in the GeneCaRNA (GeneCards ncRNA compendium) hub on the UCSC Golden Path

mRNA/cDNA for LOC105369536 Gene

1 NCBI additional mRNA sequence :

Alternative Splicing Database (ASD) splice patterns (SP) for LOC105369536 Gene

No ASD Table

Relevant External Links for LOC105369536 Gene

GeneLoc Exon Structure for
LOC105369536

Expression for LOC105369536 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC105369536 Gene

Orthologs for LOC105369536 Gene

No data available for Orthologs and Evolution for LOC105369536 Gene

Paralogs for LOC105369536 Gene

No data available for Paralogs for LOC105369536 Gene

Variants for LOC105369536 Gene

dbSNP identifiers (rs#s) for variants without ClinVar clinical significance for LOC105369536 Gene

All consequence types are included: molecular consequences (e.g. missense, synonymous), and location-based (e.g. intron, upstream).

SNP Genotyping and Copy Number Assays for research

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC105369536 Gene

Disorders for LOC105369536 Gene

No disorders were found for LOC105369536 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC105369536 Gene

Publications for LOC105369536 Gene

  1. Complete sequencing and characterization of 21,243 full-length human cDNAs. (PMID: 14702039) Ota T … Sugano S (Nature genetics 2004) 3

No data available for Mastermind for LOC105369536 Gene

Products for LOC105369536 Gene

Sources for LOC105369536 Gene