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Aliases for LOC105369533 Gene

Subcategory (RNA class) for LOC105369533 Gene

ncRNA

Quality Score for this RNA gene is

13

Aliases for LOC105369533 Gene

  • Uncharacterized LOC105369533 3

External Ids for LOC105369533 Gene

Previous GeneCards Identifiers for LOC105369533 Gene

  • GC11U902625

Summaries for LOC105369533 Gene

GeneCards Summary for LOC105369533 Gene

LOC105369533 (Uncharacterized LOC105369533) is an RNA Gene, and is affiliated with the ncRNA class.

Additional gene information for LOC105369533 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for LOC105369533 Gene

Genomics for LOC105369533 Gene

GeneHancer (GH) Regulatory Elements for LOC105369533 Gene

Promoters and enhancers for LOC105369533 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH11J121235 Promoter/Enhancer 1.9 FANTOM5 Ensembl ENCODE dbSUPER 600.7 +1.7 1653 7.8 SP1 CBFA2T2 ZNF687 SP7 CREM PRDM1 ZBED1 IKZF1 GLIS2 PKNOX1 ENSG00000254515 LOC105369533 GC11M121239 SC5D
GH11J121230 Enhancer 1.1 Ensembl ENCODE 0.4 -5.9 -5894 1.9 ELF3 CEBPG TFE3 SP1 PPARG ZNF644 KAT8 RXRA CEBPA GATAD2A LOC105369533 GC11P121190
GH11J121222 Enhancer 0.7 Ensembl 0.4 -12.3 -12337 4.4 GTF2F1 CDC5L ZBED1 POLR2A ZNF7 SMAD5 ZNF585B SCRT2 ZBTB17 GTF2A2 SC5D TECTA LOC105369533 GC11P121190
GH11J121194 Enhancer 0.9 Ensembl ENCODE 0.3 -41.8 -41789 2.1 CTCF RAD21 ZNF143 REST TRIM22 ZNF592 SMC3 RCOR1 GATA3 EZH2 TECTA SC5D GC11P121190 LOC105369533
GH11J121206 Enhancer 0.7 Ensembl 0.3 -28.5 -28501 4.1 ZNF384 JUND IKZF1 PKNOX1 IKZF2 ARNT RUNX3 ZNF592 BMI1 NR2F1 TECTA SORL1 GC11P121190 LOC105369533
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LOC105369533 on UCSC Golden Path with GeneCards custom track

Genomic Locations for LOC105369533 Gene

Genomic Locations for LOC105369533 Gene
chr11:121,237,338-121,245,159
(GRCh38/hg38)
Size:
7,822 bases
Orientation:
Plus strand

Genomic View for LOC105369533 Gene

Genes around LOC105369533 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC105369533 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC105369533 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC105369533 Gene

Proteins for LOC105369533 Gene

Post-translational modifications for LOC105369533 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC105369533 Gene

Domains & Families for LOC105369533 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for LOC105369533 Gene

Function for LOC105369533 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC105369533 Gene

Localization for LOC105369533 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC105369533 Gene

Pathways & Interactions for LOC105369533 Gene

PathCards logo

SuperPathways for LOC105369533 Gene

No Data Available

Interacting Proteins for LOC105369533 Gene

Gene Ontology (GO) - Biological Process for LOC105369533 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for LOC105369533 Gene

Drugs & Compounds for LOC105369533 Gene

No Compound Related Data Available

Transcripts for LOC105369533 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for LOC105369533 Gene

No ASD Table

Relevant External Links for LOC105369533 Gene

GeneLoc Exon Structure for
LOC105369533

No data available for mRNA/cDNA for LOC105369533 Gene

Expression for LOC105369533 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC105369533 Gene

Orthologs for LOC105369533 Gene

No data available for Orthologs and Evolution for LOC105369533 Gene

Paralogs for LOC105369533 Gene

No data available for Paralogs for LOC105369533 Gene

Variants for LOC105369533 Gene

Sequence variations from dbSNP and Humsavar for LOC105369533 Gene

SNP ID Clin Chr 11 pos Variation AA Info Type
rs1000129064 -- 121,243,473(+) G/C intron_variant
rs1000793990 -- 121,240,868(+) T/C intron_variant
rs1000958211 -- 121,242,819(+) A/G intron_variant
rs1001377399 -- 121,236,309(+) T/C upstream_transcript_variant
rs1001385636 -- 121,243,629(+) C/A intron_variant

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC105369533 Gene

Disorders for LOC105369533 Gene

No disorders were found for LOC105369533 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC105369533 Gene

Publications for LOC105369533 Gene

No publications were found for LOC105369533 Gene.

No data available for External Links for LOC105369533 Gene

Products for LOC105369533 Gene

Sources for LOC105369533 Gene

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