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Aliases for LOC105369519 Gene

Subcategory (RNA class) for LOC105369519 Gene

ncRNA

Quality Score for this RNA gene is

13

Aliases for LOC105369519 Gene

  • Uncharacterized LOC105369519 3

External Ids for LOC105369519 Gene

Previous GeneCards Identifiers for LOC105369519 Gene

  • GC11U902316

Summaries for LOC105369519 Gene

GeneCards Summary for LOC105369519 Gene

LOC105369519 (Uncharacterized LOC105369519) is an RNA Gene, and is affiliated with the ncRNA class.

Additional gene information for LOC105369519 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for LOC105369519 Gene

Genomics for LOC105369519 Gene

GeneHancer (GH) Regulatory Elements for LOC105369519 Gene

Promoters and enhancers for LOC105369519 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH11J118691 Enhancer 0.8 FANTOM5 ENCODE 600.7 +0.5 467 1.7 ZNF316 MAFK RUNX3 IKZF1 NR2F1 EBF1 TEAD3 POLR2A FOXA3 ZNF48 TREHP1 LOC105369519 ENSG00000255422 FOXR1
GH11J118699 Promoter/Enhancer 1.4 FANTOM5 Ensembl ENCODE 0.4 +8.1 8114 2 ZBTB8A PRDM12 ZNF316 ZNF623 ZBTB11 ZNF18 FOXA1 ZFP64 ZNF781 ZNF433 ENSG00000255422 IFT46 FXYD6 ENSG00000272186 TMEM25 CD3E CD3G CCDC84 KMT2A MPZL3
GH11J118695 Enhancer 0.7 ENCODE 0.7 +3.8 3830 0.4 SP1 ZBED1 IKZF1 BACH1 IKZF2 TRIM22 PKNOX1 CBFB DPF2 EED TREHP1 BCL9L UBE4A ARCN1 ENSG00000254909 VPS11 RPL23AP64 RNF26 ENSG00000245869 DDX6
GH11J118704 Promoter/Enhancer 1 Ensembl ENCODE 0.4 +13.2 13219 1 RUNX3 EBF1 ZFP91 POLR2A MYC MAX ENSG00000255422 UPK2 BCL9L RN7SL688P PHLDB1 RNU6-376P LOC105369519 PIR57704
GH11J118703 Enhancer 0.5 ENCODE 0.4 +11.7 11742 0.2 RFX1 REST ZNF10 NFIC GC11P118703 RNU6-376P ENSG00000255422 LOC105369519 PIR57704
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LOC105369519 on UCSC Golden Path with GeneCards custom track

Genomic Locations for LOC105369519 Gene

Genomic Locations for LOC105369519 Gene
chr11:118,692,005-118,709,304
(GRCh38/hg38)
Size:
17,300 bases
Orientation:
Plus strand

Genomic View for LOC105369519 Gene

Genes around LOC105369519 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC105369519 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC105369519 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC105369519 Gene

Proteins for LOC105369519 Gene

Post-translational modifications for LOC105369519 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC105369519 Gene

Domains & Families for LOC105369519 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for LOC105369519 Gene

Function for LOC105369519 Gene

Phenotypes From GWAS Catalog for LOC105369519 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC105369519 Gene

Localization for LOC105369519 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC105369519 Gene

Pathways & Interactions for LOC105369519 Gene

PathCards logo

SuperPathways for LOC105369519 Gene

No Data Available

Interacting Proteins for LOC105369519 Gene

Gene Ontology (GO) - Biological Process for LOC105369519 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for LOC105369519 Gene

Drugs & Compounds for LOC105369519 Gene

No Compound Related Data Available

Transcripts for LOC105369519 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for LOC105369519 Gene

No ASD Table

Relevant External Links for LOC105369519 Gene

GeneLoc Exon Structure for
LOC105369519

No data available for mRNA/cDNA for LOC105369519 Gene

Expression for LOC105369519 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC105369519 Gene

Orthologs for LOC105369519 Gene

No data available for Orthologs and Evolution for LOC105369519 Gene

Paralogs for LOC105369519 Gene

No data available for Paralogs for LOC105369519 Gene

Variants for LOC105369519 Gene

Sequence variations from dbSNP and Humsavar for LOC105369519 Gene

SNP ID Clin Chr 11 pos Variation AA Info Type
rs1000237615 -- 118,694,318(+) G/C genic_upstream_transcript_variant, intron_variant
rs1000361690 -- 118,694,193(+) C/T genic_upstream_transcript_variant, intron_variant
rs1000971938 -- 118,704,522(+) G/T intron_variant
rs1001207975 -- 118,707,063(+) C/T intron_variant
rs1001311399 -- 118,700,438(+) G/A genic_upstream_transcript_variant, intron_variant, non_coding_transcript_variant, upstream_transcript_variant

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC105369519 Gene

Disorders for LOC105369519 Gene

No disorders were found for LOC105369519 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC105369519 Gene

Publications for LOC105369519 Gene

No publications were found for LOC105369519 Gene.

No data available for External Links for LOC105369519 Gene

Products for LOC105369519 Gene

Sources for LOC105369519 Gene

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