Free for academic non-profit institutions. Other users need a Commercial license

Aliases for LOC105369513 Gene

Subcategory (RNA class) for LOC105369513 Gene

ncRNA

Quality Score for this RNA gene is

13

Aliases for LOC105369513 Gene

  • Uncharacterized LOC105369513 3

External Ids for LOC105369513 Gene

Previous GeneCards Identifiers for LOC105369513 Gene

  • GC11U902337

Summaries for LOC105369513 Gene

GeneCards Summary for LOC105369513 Gene

LOC105369513 (Uncharacterized LOC105369513) is an RNA Gene, and is affiliated with the ncRNA class.

Additional gene information for LOC105369513 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for LOC105369513 Gene

Genomics for LOC105369513 Gene

GeneHancer (GH) Regulatory Elements for LOC105369513 Gene

Promoters and enhancers for LOC105369513 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH11J116070 Enhancer 1.2 FANTOM5 Ensembl ENCODE 0.4 +8.2 8161 5.4 SP1 ZNF687 RELA CREM MLLT1 IKZF1 POLR2A ZBTB33 BACH1 IKZF2 LOC105369513 GC11P116053
GH11J116078 Enhancer 0.7 Ensembl ENCODE 0.7 +2.7 2704 0.5 CTCF RAD21 ZIC2 ZNF143 SMARCA5 RCOR1 LOC105369513 GC11P116053
GH11J116061 Enhancer 0.9 Ensembl ENCODE 0.4 +18.4 18356 2.2 NFIB IKZF1 ZNF544 ZNF300 ZNF776 POLR2A ZNF692 PKNOX1 EED ZNF491 BUD13 GC11P116053 LOC105369513
GH11J116052 Enhancer 0.6 Ensembl ENCODE 0.3 +27.8 27755 1.8 POLR2A USF1 GC11P116053 LOC105369513 ENSG00000239600
GH11J116036 Enhancer 0.5 Ensembl 0.3 +44.6 44556 1 TCF7L2 POLR2A WT1 GLIS1 GC11P116053 LOC105369513 ENSG00000239600
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LOC105369513 on UCSC Golden Path with GeneCards custom track

Genomic Locations for LOC105369513 Gene

Genomic Locations for LOC105369513 Gene
chr11:116,033,385-116,081,056
(GRCh38/hg38)
Size:
47,672 bases
Orientation:
Minus strand

Genomic View for LOC105369513 Gene

Genes around LOC105369513 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC105369513 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC105369513 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC105369513 Gene

Proteins for LOC105369513 Gene

Post-translational modifications for LOC105369513 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC105369513 Gene

Domains & Families for LOC105369513 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for LOC105369513 Gene

Function for LOC105369513 Gene

Phenotypes From GWAS Catalog for LOC105369513 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC105369513 Gene

Localization for LOC105369513 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC105369513 Gene

Pathways & Interactions for LOC105369513 Gene

PathCards logo

SuperPathways for LOC105369513 Gene

No Data Available

Interacting Proteins for LOC105369513 Gene

Gene Ontology (GO) - Biological Process for LOC105369513 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for LOC105369513 Gene

Drugs & Compounds for LOC105369513 Gene

No Compound Related Data Available

Transcripts for LOC105369513 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for LOC105369513 Gene

No ASD Table

Relevant External Links for LOC105369513 Gene

GeneLoc Exon Structure for
LOC105369513

No data available for mRNA/cDNA for LOC105369513 Gene

Expression for LOC105369513 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC105369513 Gene

Orthologs for LOC105369513 Gene

No data available for Orthologs and Evolution for LOC105369513 Gene

Paralogs for LOC105369513 Gene

No data available for Paralogs for LOC105369513 Gene

Variants for LOC105369513 Gene

Sequence variations from dbSNP and Humsavar for LOC105369513 Gene

SNP ID Clin Chr 11 pos Variation AA Info Type
rs1000060941 -- 116,068,988(-) G/A intron_variant
rs1000063645 -- 116,058,375(-) T/C genic_downstream_transcript_variant, intron_variant
rs1000091754 -- 116,068,773(-) C/T intron_variant
rs1000362517 -- 116,052,293(-) C/T genic_downstream_transcript_variant, intron_variant
rs1000394842 -- 116,042,137(-) G/A genic_downstream_transcript_variant, intron_variant

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC105369513 Gene

Disorders for LOC105369513 Gene

No disorders were found for LOC105369513 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC105369513 Gene

Publications for LOC105369513 Gene

No publications were found for LOC105369513 Gene.

No data available for External Links for LOC105369513 Gene

Products for LOC105369513 Gene

Sources for LOC105369513 Gene

Content
Loading form....