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Aliases for LOC105369483 Gene

Subcategory (RNA class) for LOC105369483 Gene

ncRNA

Quality Score for this RNA gene is

13

Aliases for LOC105369483 Gene

  • Uncharacterized LOC105369483 3

External Ids for LOC105369483 Gene

Previous GeneCards Identifiers for LOC105369483 Gene

  • GC11U902303

Summaries for LOC105369483 Gene

GeneCards Summary for LOC105369483 Gene

LOC105369483 (Uncharacterized LOC105369483) is an RNA Gene, and is affiliated with the ncRNA class.

Additional gene information for LOC105369483 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for LOC105369483 Gene

Genomics for LOC105369483 Gene

GeneHancer (GH) Regulatory Elements for LOC105369483 Gene

Promoters and enhancers for LOC105369483 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH11J109857 Enhancer 0.6 ENCODE 600.7 +1.3 1255 2.7 MAFK USF1 FOS FOSL1 FOSL2 JUN ADNP PRDM10 KDM1A JUND LOC105369483 LINC02715
GH11J109863 Enhancer 1 Ensembl ENCODE 0.7 -4.3 -4265 2.3 CTCF JUND RELA CREM ZBED1 IKZF1 BACH1 IKZF2 LARP7 TRIM22 LOC105369483 GC11M109907 RDX
GH11J109853 Enhancer 0.8 Ensembl ENCODE 0.4 +7.3 7286 0.6 CC2D1A CTCF RAD21 ARID2 REST TRIM22 BCLAF1 SMC3 NFIC ZNF654 LOC105369483 LINC02715
GH11J109891 Enhancer 0.9 Ensembl ENCODE 0.3 -31.9 -31896 1.8 CC2D1A CBFA2T2 TRIM24 SMARCA4 DPF2 EP300 TCF12 ARNT FOSL1 NCOR1 GC11M109907 LOC105369483 RDX
GH11J109894 Enhancer 0.7 Ensembl ENCODE 0.3 -33.9 -33895 0.6 IKZF1 PRDM10 HDAC1 CTBP1 EHMT2 ZNF592 GC11M109907 LOC105369483 RDX
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LOC105369483 on UCSC Golden Path with GeneCards custom track

Genomic Locations for LOC105369483 Gene

Genomic Locations for LOC105369483 Gene
chr11:109,859,559-109,860,587
(GRCh38/hg38)
Size:
1,029 bases
Orientation:
Minus strand

Genomic View for LOC105369483 Gene

Genes around LOC105369483 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC105369483 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC105369483 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC105369483 Gene

Proteins for LOC105369483 Gene

Post-translational modifications for LOC105369483 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC105369483 Gene

Domains & Families for LOC105369483 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for LOC105369483 Gene

Function for LOC105369483 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC105369483 Gene

Localization for LOC105369483 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC105369483 Gene

Pathways & Interactions for LOC105369483 Gene

PathCards logo

SuperPathways for LOC105369483 Gene

No Data Available

Interacting Proteins for LOC105369483 Gene

Gene Ontology (GO) - Biological Process for LOC105369483 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for LOC105369483 Gene

Drugs & Compounds for LOC105369483 Gene

No Compound Related Data Available

Transcripts for LOC105369483 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for LOC105369483 Gene

No ASD Table

Relevant External Links for LOC105369483 Gene

GeneLoc Exon Structure for
LOC105369483

No data available for mRNA/cDNA for LOC105369483 Gene

Expression for LOC105369483 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC105369483 Gene

Orthologs for LOC105369483 Gene

No data available for Orthologs and Evolution for LOC105369483 Gene

Paralogs for LOC105369483 Gene

No data available for Paralogs for LOC105369483 Gene

Variants for LOC105369483 Gene

Sequence variations from dbSNP and Humsavar for LOC105369483 Gene

SNP ID Clin Chr 11 pos Variation AA Info Type
rs1000163218 -- 109,859,631(-) C/A/T non_coding_transcript_variant
rs1001976895 -- 109,862,483(-) G/A upstream_transcript_variant
rs1002220460 -- 109,862,582(-) A/G upstream_transcript_variant
rs1002814089 -- 109,861,158(-) C/A upstream_transcript_variant
rs1002965421 -- 109,860,848(-) A/T upstream_transcript_variant

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC105369483 Gene

Disorders for LOC105369483 Gene

No disorders were found for LOC105369483 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC105369483 Gene

Publications for LOC105369483 Gene

No publications were found for LOC105369483 Gene.

No data available for External Links for LOC105369483 Gene

Products for LOC105369483 Gene

Sources for LOC105369483 Gene

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