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Aliases for LOC105369460 Gene

Subcategory (RNA class) for LOC105369460 Gene

ncRNA

Quality Score for this RNA gene is

13

Aliases for LOC105369460 Gene

  • Uncharacterized LOC105369460 3

External Ids for LOC105369460 Gene

Previous GeneCards Identifiers for LOC105369460 Gene

  • GC11U902268

Summaries for LOC105369460 Gene

GeneCards Summary for LOC105369460 Gene

LOC105369460 (Uncharacterized LOC105369460) is an RNA Gene, and is affiliated with the ncRNA class.

Additional gene information for LOC105369460 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for LOC105369460 Gene

Genomics for LOC105369460 Gene

GeneHancer (GH) Regulatory Elements for LOC105369460 Gene

Promoters and enhancers for LOC105369460 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH11J102267 Promoter/Enhancer 1.9 EPDnew FANTOM5 ENCODE dbSUPER 600.7 +1.1 1075 3.9 ELF3 SP7 ELF1 SP1 PPARG SP5 PRDM1 SMARCA4 CREB1 GLIS2 BIRC3 LOC105369460 DYNC2H1 ENSG00000254422 BIRC2 RPS6P17
GH11J102271 Enhancer 1.1 Ensembl ENCODE dbSUPER 0.7 +4.5 4517 1.4 ELF3 PPARG SP5 FOXK2 ZNF316 SOX13 TCF7 MAFK FOXA2 MAFG LOC105369460 RPS6P17
GH11J102293 Promoter/Enhancer 1.4 Ensembl ENCODE dbSUPER 0.3 +26.9 26930 2.6 CTCF RAD21 IKZF1 IKZF2 ZNF143 REST PKNOX1 TRIM22 CEBPB KAT7 ENSG00000243777 RPS6P17 BIRC3 BIRC2 LOC105369460
GH11J102278 Enhancer 1.1 ENCODE dbSUPER 0.4 +12.3 12274 2.5 ZNF652 ELF3 CEBPG RERE ZSCAN21 TFE3 SP1 HNF1A PPARG PRDM1 BIRC2 ENSG00000254422 ENSG00000256916 MMP20 MMP7 BIRC3 RPS6P17 LOC105369460
GH11J102242 Enhancer 1.2 Ensembl ENCODE dbSUPER 0.3 -25.3 -25284 1 NFIB SP1 PPARG KAT8 RXRA RXRB ZNF341 FOXA2 SOX13 TBX3 ENSG00000254422 LOC105369460
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LOC105369460 on UCSC Golden Path with GeneCards custom track

Genomic Locations for LOC105369460 Gene

Genomic Locations for LOC105369460 Gene
chr11:102,267,961-102,281,239
(GRCh38/hg38)
Size:
13,279 bases
Orientation:
Plus strand

Genomic View for LOC105369460 Gene

Genes around LOC105369460 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC105369460 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC105369460 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC105369460 Gene

Proteins for LOC105369460 Gene

Post-translational modifications for LOC105369460 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC105369460 Gene

Domains & Families for LOC105369460 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for LOC105369460 Gene

Function for LOC105369460 Gene

Phenotypes From GWAS Catalog for LOC105369460 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC105369460 Gene

Localization for LOC105369460 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC105369460 Gene

Pathways & Interactions for LOC105369460 Gene

PathCards logo

SuperPathways for LOC105369460 Gene

No Data Available

Interacting Proteins for LOC105369460 Gene

Gene Ontology (GO) - Biological Process for LOC105369460 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for LOC105369460 Gene

Drugs & Compounds for LOC105369460 Gene

No Compound Related Data Available

Transcripts for LOC105369460 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for LOC105369460 Gene

No ASD Table

Relevant External Links for LOC105369460 Gene

GeneLoc Exon Structure for
LOC105369460

No data available for mRNA/cDNA for LOC105369460 Gene

Expression for LOC105369460 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC105369460 Gene

Orthologs for LOC105369460 Gene

No data available for Orthologs and Evolution for LOC105369460 Gene

Paralogs for LOC105369460 Gene

No data available for Paralogs for LOC105369460 Gene

Variants for LOC105369460 Gene

Sequence variations from dbSNP and Humsavar for LOC105369460 Gene

SNP ID Clin Chr 11 pos Variation AA Info Type
rs1000075889 -- 102,272,252(+) T/C intron_variant
rs1000457935 -- 102,273,913(+) T/C intron_variant
rs1000595715 -- 102,266,507(+) A/C upstream_transcript_variant
rs1000672687 -- 102,268,001(+) G/C intron_variant
rs1000920210 -- 102,279,370(+) G/T intron_variant

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC105369460 Gene

Disorders for LOC105369460 Gene

No disorders were found for LOC105369460 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC105369460 Gene

Publications for LOC105369460 Gene

No publications were found for LOC105369460 Gene.

No data available for External Links for LOC105369460 Gene

Products for LOC105369460 Gene

Sources for LOC105369460 Gene

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