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Aliases for LOC105369402 Gene

Subcategory (RNA class) for LOC105369402 Gene

ncRNA

Quality Score for this RNA gene is

13

Aliases for LOC105369402 Gene

  • Uncharacterized LOC105369402 3

External Ids for LOC105369402 Gene

Previous GeneCards Identifiers for LOC105369402 Gene

  • GC11U902621

Summaries for LOC105369402 Gene

GeneCards Summary for LOC105369402 Gene

LOC105369402 (Uncharacterized LOC105369402) is an RNA Gene, and is affiliated with the ncRNA class.

Additional gene information for LOC105369402 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for LOC105369402 Gene

Genomics for LOC105369402 Gene

GeneHancer (GH) Regulatory Elements for LOC105369402 Gene

Promoters and enhancers for LOC105369402 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH11J078281 Enhancer 1.8 FANTOM5 Ensembl ENCODE dbSUPER 0.4 -5.4 -5447 18.6 ZNF652 CC2D1A ELF3 ZKSCAN8 MNT CBFA2T2 ZNF148 MLLT1 CEBPG RERE GAB2 INTS4 ENSG00000255449 LINC02728 ENSG00000254420 ENSG00000254649 ENSG00000241782 NARS2 AAMDC KCTD21
GH11J078311 Promoter/Enhancer 1.4 EPDnew ENCODE dbSUPER 0.4 +15.9 15919 0.6 NCOA3 SP1 ZNF384 RXRA RXRB FOXA2 JUND RUNX3 YY1 ZBTB33 GAB2 ENSG00000254649 NARS2 ENSG00000254420 LOC105369402
GH11J078310 Enhancer 1 ENCODE dbSUPER 0.4 +14.4 14433 1.1 RELA SP1 CREM MLLT1 ZBED1 IKZF1 RXRA IKZF2 CEBPA GATAD2A ENSG00000254649 GAB2 NARS2 ENSG00000254420 LOC105369402
GH11J078324 Enhancer 1.2 Ensembl ENCODE dbSUPER 0.3 +28.3 28253 5.2 BACH1 EGR1 SMARCA4 MTA1 DPF2 IKZF1 ATF1 PKNOX1 LEF1 HDAC1 ENSG00000254420 NARS2 LOC105369402 GAB2
GH11J078277 Enhancer 1 Ensembl ENCODE dbSUPER 0.4 -18.5 -18547 3.6 NFIB RXRA ZNF7 SP1 NR2C1 NR2C2 NFIC NR2F2 HNF4A NFIA ENSG00000254649 NARS2 GAB2 AAMDC LOC105369402 PIR56737
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LOC105369402 on UCSC Golden Path with GeneCards custom track

Genomic Locations for LOC105369402 Gene

Genomic Locations for LOC105369402 Gene
chr11:78,296,148-78,319,731
(GRCh38/hg38)
Size:
23,584 bases
Orientation:
Plus strand

Genomic View for LOC105369402 Gene

Genes around LOC105369402 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC105369402 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC105369402 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC105369402 Gene

Proteins for LOC105369402 Gene

Post-translational modifications for LOC105369402 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC105369402 Gene

Domains & Families for LOC105369402 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for LOC105369402 Gene

Function for LOC105369402 Gene

Phenotypes From GWAS Catalog for LOC105369402 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC105369402 Gene

Localization for LOC105369402 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC105369402 Gene

Pathways & Interactions for LOC105369402 Gene

PathCards logo

SuperPathways for LOC105369402 Gene

No Data Available

Interacting Proteins for LOC105369402 Gene

Gene Ontology (GO) - Biological Process for LOC105369402 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for LOC105369402 Gene

Drugs & Compounds for LOC105369402 Gene

No Compound Related Data Available

Transcripts for LOC105369402 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for LOC105369402 Gene

No ASD Table

Relevant External Links for LOC105369402 Gene

GeneLoc Exon Structure for
LOC105369402

No data available for mRNA/cDNA for LOC105369402 Gene

Expression for LOC105369402 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC105369402 Gene

Orthologs for LOC105369402 Gene

No data available for Orthologs and Evolution for LOC105369402 Gene

Paralogs for LOC105369402 Gene

No data available for Paralogs for LOC105369402 Gene

Variants for LOC105369402 Gene

Sequence variations from dbSNP and Humsavar for LOC105369402 Gene

SNP ID Clin Chr 11 pos Variation AA Info Type
rs1000249503 -- 78,310,530(+) A/G intron_variant
rs1000278557 -- 78,304,349(+) T/C intron_variant
rs1000392273 -- 78,299,317(+) C/T intron_variant
rs1000607901 -- 78,305,946(+) C/A intron_variant
rs1000642094 -- 78,306,305(+) A/T intron_variant

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC105369402 Gene

Disorders for LOC105369402 Gene

No disorders were found for LOC105369402 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC105369402 Gene

Publications for LOC105369402 Gene

No publications were found for LOC105369402 Gene.

No data available for External Links for LOC105369402 Gene

Products for LOC105369402 Gene

Sources for LOC105369402 Gene

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