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Aliases for LOC105369401 Gene

Subcategory (RNA class) for LOC105369401 Gene

ncRNA

Quality Score for this RNA gene is

13

Aliases for LOC105369401 Gene

  • Uncharacterized LOC105369401 3

External Ids for LOC105369401 Gene

Previous GeneCards Identifiers for LOC105369401 Gene

  • GC11U902542

Summaries for LOC105369401 Gene

GeneCards Summary for LOC105369401 Gene

LOC105369401 (Uncharacterized LOC105369401) is an RNA Gene, and is affiliated with the ncRNA class.

Additional gene information for LOC105369401 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for LOC105369401 Gene

Genomics for LOC105369401 Gene

GeneHancer (GH) Regulatory Elements for LOC105369401 Gene

Promoters and enhancers for LOC105369401 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH11J078077 Promoter/Enhancer 2.1 EPDnew Ensembl ENCODE 600.7 -1.5 -1460 4.3 MTA3 SP1 ZFX ELF3 ZKSCAN8 SIX5 ZNF148 NKRF POLR2A ZNF121 NDUFC2 LOC105369401 NDUFC2-KCTD14 KCTD21-AS1 RSF1 THRSP
GH11J078082 Promoter/Enhancer 1.4 Ensembl ENCODE 0.7 +3.9 3885 4.6 ZNF652 ELF3 CEBPG RERE NFIB TFE3 HNF1A PPARG SP5 ZNF644 KCTD21-AS1 THRSP KCTD14 ENSG00000254829 INTS4 NDUFC2 ALG8 AAMDC LOC105369401 GC11P078094
GH11J078090 Enhancer 1.1 Ensembl ENCODE 0.4 +9.5 9480 1.6 ZNF652 ELF3 CEBPG RERE TFE3 SP1 PPARG SP5 HMG20B RXRA KCTD21-AS1 KCTD14 THRSP ENSG00000254829 INTS4 NDUFC2 KCTD21 GC11P078094 LOC105369401
GH11J078094 Enhancer 0.5 Ensembl 0.4 +13.1 13100 0.6 PKNOX1 ELF1 NR2F1 CEBPB GC11P078094 THRSP LOC105369401
GH11J078088 Enhancer 0.2 Ensembl 0.4 +7.3 7300 0.2 THRSP KCTD14 ENSG00000254829 INTS4 LOC105369401 GC11P078094
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LOC105369401 on UCSC Golden Path with GeneCards custom track

Genomic Locations for LOC105369401 Gene

Genomic Locations for LOC105369401 Gene
chr11:78,081,401-78,087,362
(GRCh38/hg38)
Size:
5,962 bases
Orientation:
Plus strand

Genomic View for LOC105369401 Gene

Genes around LOC105369401 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC105369401 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC105369401 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC105369401 Gene

Proteins for LOC105369401 Gene

Post-translational modifications for LOC105369401 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC105369401 Gene

Domains & Families for LOC105369401 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for LOC105369401 Gene

Function for LOC105369401 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC105369401 Gene

Localization for LOC105369401 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC105369401 Gene

Pathways & Interactions for LOC105369401 Gene

PathCards logo

SuperPathways for LOC105369401 Gene

No Data Available

Interacting Proteins for LOC105369401 Gene

Gene Ontology (GO) - Biological Process for LOC105369401 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for LOC105369401 Gene

Drugs & Compounds for LOC105369401 Gene

No Compound Related Data Available

Transcripts for LOC105369401 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for LOC105369401 Gene

No ASD Table

Relevant External Links for LOC105369401 Gene

GeneLoc Exon Structure for
LOC105369401

No data available for mRNA/cDNA for LOC105369401 Gene

Expression for LOC105369401 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC105369401 Gene

Orthologs for LOC105369401 Gene

No data available for Orthologs and Evolution for LOC105369401 Gene

Paralogs for LOC105369401 Gene

No data available for Paralogs for LOC105369401 Gene

Variants for LOC105369401 Gene

Sequence variations from dbSNP and Humsavar for LOC105369401 Gene

SNP ID Clin Chr 11 pos Variation AA Info Type
rs1000005917 -- 78,083,900(+) C/A intron_variant
rs1000071832 -- 78,082,371(+) T/C intron_variant
rs1000560113 -- 78,086,167(+) C/T non_coding_transcript_variant
rs1001143595 -- 78,080,085(+) C/G upstream_transcript_variant
rs1001677856 -- 78,087,218(+) T/A non_coding_transcript_variant

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC105369401 Gene

Disorders for LOC105369401 Gene

No disorders were found for LOC105369401 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC105369401 Gene

Publications for LOC105369401 Gene

No publications were found for LOC105369401 Gene.

No data available for External Links for LOC105369401 Gene

Products for LOC105369401 Gene

Sources for LOC105369401 Gene

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