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Aliases for LOC105369400 Gene

Subcategory (RNA class) for LOC105369400 Gene

ncRNA

Quality Score for this RNA gene is

13

Aliases for LOC105369400 Gene

  • Uncharacterized LOC105369400 3

External Ids for LOC105369400 Gene

Previous GeneCards Identifiers for LOC105369400 Gene

  • GC11U902476

Summaries for LOC105369400 Gene

GeneCards Summary for LOC105369400 Gene

LOC105369400 (Uncharacterized LOC105369400) is an RNA Gene, and is affiliated with the ncRNA class.

Additional gene information for LOC105369400 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for LOC105369400 Gene

Genomics for LOC105369400 Gene

GeneHancer (GH) Regulatory Elements for LOC105369400 Gene

Promoters and enhancers for LOC105369400 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH11J077063 Enhancer 0.8 Ensembl ENCODE dbSUPER 600.7 +0.3 291 0.5 CTCF RAD21 LOC105369400 LOC105369399
GH11J077061 Enhancer 1.1 ENCODE dbSUPER 0.7 +2.4 2354 0.2 ELF3 CEBPG RERE SP1 HNF1A PPARG SP5 ZNF644 KAT8 HMG20B LOC105369400 LOC105369399
GH11J077053 Enhancer 0.7 Ensembl 0.4 +9.7 9722 0.8 ZKSCAN8 CBFA2T2 ZNF148 ZNF639 SMARCA4 CAVIN1 ZNF740 SOX6 ZNF766 ZBTB11 EMSY THAP12 OMP INTS4 ENSG00000241782 RSF1 ENSG00000255449 ENSG00000261578 LOC105369400 LOC105369399
GH11J077048 Enhancer 0.6 Ensembl ENCODE dbSUPER 0.4 +14.5 14522 1.2 LOC105369399 OMP LOC105369400
GH11J077055 Enhancer 0.4 ENCODE 0.4 +8.3 8254 0.2 CREB1 ATF7 ATF2 OMP LOC105369399 LOC105369400
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LOC105369400 on UCSC Golden Path with GeneCards custom track

Genomic Locations for LOC105369400 Gene

Genomic Locations for LOC105369400 Gene
chr11:77,058,401-77,063,723
(GRCh38/hg38)
Size:
5,323 bases
Orientation:
Minus strand

Genomic View for LOC105369400 Gene

Genes around LOC105369400 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC105369400 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC105369400 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC105369400 Gene

Proteins for LOC105369400 Gene

Post-translational modifications for LOC105369400 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC105369400 Gene

Domains & Families for LOC105369400 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for LOC105369400 Gene

Function for LOC105369400 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC105369400 Gene

Localization for LOC105369400 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC105369400 Gene

Pathways & Interactions for LOC105369400 Gene

PathCards logo

SuperPathways for LOC105369400 Gene

No Data Available

Interacting Proteins for LOC105369400 Gene

Gene Ontology (GO) - Biological Process for LOC105369400 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for LOC105369400 Gene

Drugs & Compounds for LOC105369400 Gene

No Compound Related Data Available

Transcripts for LOC105369400 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for LOC105369400 Gene

No ASD Table

Relevant External Links for LOC105369400 Gene

GeneLoc Exon Structure for
LOC105369400

No data available for mRNA/cDNA for LOC105369400 Gene

Expression for LOC105369400 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC105369400 Gene

Orthologs for LOC105369400 Gene

No data available for Orthologs and Evolution for LOC105369400 Gene

Paralogs for LOC105369400 Gene

No data available for Paralogs for LOC105369400 Gene

Variants for LOC105369400 Gene

Sequence variations from dbSNP and Humsavar for LOC105369400 Gene

SNP ID Clin Chr 11 pos Variation AA Info Type
rs1001601617 -- 77,063,893(-) C/T upstream_transcript_variant
rs1001881384 -- 77,064,840(-) G/A upstream_transcript_variant
rs1001935431 -- 77,065,026(-) T/C upstream_transcript_variant
rs1002882100 -- 77,058,877(-) G/T intron_variant
rs1004383171 -- 77,058,551(-) A/G intron_variant

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC105369400 Gene

Disorders for LOC105369400 Gene

No disorders were found for LOC105369400 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC105369400 Gene

Publications for LOC105369400 Gene

No publications were found for LOC105369400 Gene.

No data available for External Links for LOC105369400 Gene

Products for LOC105369400 Gene

Sources for LOC105369400 Gene

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