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Aliases for LOC105369399 Gene

Subcategory (RNA class) for LOC105369399 Gene

ncRNA

Quality Score for this RNA gene is

13

Aliases for LOC105369399 Gene

  • Uncharacterized LOC105369399 3

External Ids for LOC105369399 Gene

Previous GeneCards Identifiers for LOC105369399 Gene

  • GC11U902281

Summaries for LOC105369399 Gene

GeneCards Summary for LOC105369399 Gene

LOC105369399 (Uncharacterized LOC105369399) is an RNA Gene, and is affiliated with the ncRNA class.

Additional gene information for LOC105369399 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for LOC105369399 Gene

Genomics for LOC105369399 Gene

GeneHancer (GH) Regulatory Elements for LOC105369399 Gene

Promoters and enhancers for LOC105369399 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH11J077046 Enhancer 1 ENCODE dbSUPER 600.7 -0.4 -377 1.8 MLLT1 CSDE1 ZNF384 CTCF ELF1 RAD21 CREB1 RFX1 ZNF143 REST LOC105369399 INTS4 OMP ENSG00000241782 TSKU ENSG00000255449 ENSG00000261578 EMSY B3GNT6
GH11J077045 Enhancer 0.8 ENCODE 600.7 -1.7 -1687 0.1 CC2D1A CTCF ZNF148 GTF2F1 MZF1 RXRA ARID2 NRF1 TARDBP REST LOC105369399 OMP B3GNT6
GH11J077048 Enhancer 0.6 Ensembl ENCODE dbSUPER 600.7 +1.3 1335 1.2 LOC105369399 OMP LOC105369400
GH11J077034 Promoter/Enhancer 2.1 EPDnew Ensembl ENCODE dbSUPER 0.4 -12.1 -12098 3.2 ELF3 RERE NFIB NCOA3 ZNF24 TFE3 HNF1A SP5 IKZF1 CEBPG B3GNT6 OMP MYO7A ACER3 CAPN5 LOC105369399
GH11J077061 Enhancer 1.1 ENCODE dbSUPER 0.4 +13.5 13503 0.2 ELF3 CEBPG RERE SP1 HNF1A PPARG SP5 ZNF644 KAT8 HMG20B LOC105369400 LOC105369399
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LOC105369399 on UCSC Golden Path with GeneCards custom track

Genomic Locations for LOC105369399 Gene

Genomic Locations for LOC105369399 Gene
chr11:77,047,866-77,048,740
(GRCh38/hg38)
Size:
875 bases
Orientation:
Plus strand

Genomic View for LOC105369399 Gene

Genes around LOC105369399 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC105369399 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC105369399 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC105369399 Gene

Proteins for LOC105369399 Gene

Post-translational modifications for LOC105369399 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC105369399 Gene

Domains & Families for LOC105369399 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for LOC105369399 Gene

Function for LOC105369399 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC105369399 Gene

Localization for LOC105369399 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC105369399 Gene

Pathways & Interactions for LOC105369399 Gene

PathCards logo

SuperPathways for LOC105369399 Gene

No Data Available

Interacting Proteins for LOC105369399 Gene

Gene Ontology (GO) - Biological Process for LOC105369399 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for LOC105369399 Gene

Drugs & Compounds for LOC105369399 Gene

No Compound Related Data Available

Transcripts for LOC105369399 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for LOC105369399 Gene

No ASD Table

Relevant External Links for LOC105369399 Gene

GeneLoc Exon Structure for
LOC105369399

No data available for mRNA/cDNA for LOC105369399 Gene

Expression for LOC105369399 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC105369399 Gene

Orthologs for LOC105369399 Gene

No data available for Orthologs and Evolution for LOC105369399 Gene

Paralogs for LOC105369399 Gene

No data available for Paralogs for LOC105369399 Gene

Variants for LOC105369399 Gene

Sequence variations from dbSNP and Humsavar for LOC105369399 Gene

SNP ID Clin Chr 11 pos Variation AA Info Type
rs1002174015 -- 77,047,176(+) C/A/T upstream_transcript_variant
rs1004192344 -- 77,046,864(+) G/C upstream_transcript_variant
rs1005106429 -- 77,048,585(+) C/T non_coding_transcript_variant
rs1007431138 -- 77,046,354(+) C/T upstream_transcript_variant
rs1008996132 -- 77,048,259(+) G/A intron_variant

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC105369399 Gene

Disorders for LOC105369399 Gene

No disorders were found for LOC105369399 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC105369399 Gene

Publications for LOC105369399 Gene

No publications were found for LOC105369399 Gene.

No data available for External Links for LOC105369399 Gene

Products for LOC105369399 Gene

Sources for LOC105369399 Gene

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