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Aliases for LOC105369381 Gene

Subcategory (RNA class) for LOC105369381 Gene

ncRNA

Quality Score for this RNA gene is

13

Aliases for LOC105369381 Gene

  • Uncharacterized LOC105369381 3

External Ids for LOC105369381 Gene

Previous GeneCards Identifiers for LOC105369381 Gene

  • GC11U902403

Summaries for LOC105369381 Gene

GeneCards Summary for LOC105369381 Gene

LOC105369381 (Uncharacterized LOC105369381) is an RNA Gene, and is affiliated with the ncRNA class.

Additional gene information for LOC105369381 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for LOC105369381 Gene

Genomics for LOC105369381 Gene

GeneHancer (GH) Regulatory Elements for LOC105369381 Gene

Promoters and enhancers for LOC105369381 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH11J073182 Promoter/Enhancer 1.5 EPDnew ENCODE dbSUPER 600.7 +0.4 388 1.1 CBFA2T2 TRIM24 SP5 SMARCA4 GMEB1 DPF2 IKZF1 GATAD2A REST LEF1 GC11M073182 LOC105369381 FCHSD2 STARD10 ENSG00000256568
GH11J073174 Enhancer 1.4 Ensembl ENCODE dbSUPER 0.4 +7.9 7875 6.2 ELF3 CC2D1A CTCF ZNF687 AHR RELA SP1 PPARG SP5 CREM ENSG00000256568 FCHSD2 RNU6-672P STARD10 ARAP1 LOC105369381
GH11J073150 Enhancer 1.5 FANTOM5 ENCODE dbSUPER 0.3 +27.8 27839 10.3 SP1 ELF3 POLR2A ZNF687 AHR RELA PPARG SP5 CREM MLLT1 FCHSD2 STARD10 LINC01537 FAM168A ENSG00000256568 LOC105369381
GH11J073167 Enhancer 1.1 Ensembl ENCODE dbSUPER 0.4 +16.2 16177 1.2 SP1 RXRA RXRB FOXA2 SOX13 EED JUND YY1 TEAD1 GABPA STARD10 FCHSD2 RNU6-672P ENSG00000256568 LOC105369381
GH11J073163 Enhancer 0.8 ENCODE dbSUPER 0.4 +19.3 19264 2.2 IKZF1 PRDM10 GATAD2A ZNF24 CTBP1 HDGF TEAD1 GATA3 NFIA TEAD3 FCHSD2 RNU6-672P LINC01537 ENSG00000256568 LOC105369381
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LOC105369381 on UCSC Golden Path with GeneCards custom track

Genomic Locations for LOC105369381 Gene

Genomic Locations for LOC105369381 Gene
chr11:73,156,048-73,183,578
(GRCh38/hg38)
Size:
27,531 bases
Orientation:
Minus strand

Genomic View for LOC105369381 Gene

Genes around LOC105369381 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC105369381 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC105369381 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC105369381 Gene

Proteins for LOC105369381 Gene

Post-translational modifications for LOC105369381 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC105369381 Gene

Domains & Families for LOC105369381 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for LOC105369381 Gene

Function for LOC105369381 Gene

Phenotypes From GWAS Catalog for LOC105369381 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC105369381 Gene

Localization for LOC105369381 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC105369381 Gene

Pathways & Interactions for LOC105369381 Gene

PathCards logo

SuperPathways for LOC105369381 Gene

No Data Available

Interacting Proteins for LOC105369381 Gene

Gene Ontology (GO) - Biological Process for LOC105369381 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for LOC105369381 Gene

Drugs & Compounds for LOC105369381 Gene

No Compound Related Data Available

Transcripts for LOC105369381 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for LOC105369381 Gene

No ASD Table

Relevant External Links for LOC105369381 Gene

GeneLoc Exon Structure for
LOC105369381

No data available for mRNA/cDNA for LOC105369381 Gene

Expression for LOC105369381 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC105369381 Gene

Orthologs for LOC105369381 Gene

No data available for Orthologs and Evolution for LOC105369381 Gene

Paralogs for LOC105369381 Gene

No data available for Paralogs for LOC105369381 Gene

Variants for LOC105369381 Gene

Sequence variations from dbSNP and Humsavar for LOC105369381 Gene

SNP ID Clin Chr 11 pos Variation AA Info Type
rs1000011516 -- 73,166,621(-) C/T intron_variant
rs1000056318 -- 73,164,299(-) G/A intron_variant, non_coding_transcript_variant
rs1000073324 -- 73,168,094(-) C/G/T intron_variant
rs1000108113 -- 73,159,340(-) G/A intron_variant
rs1000178866 -- 73,184,341(-) C/T upstream_transcript_variant

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC105369381 Gene

Disorders for LOC105369381 Gene

No disorders were found for LOC105369381 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC105369381 Gene

Publications for LOC105369381 Gene

No publications were found for LOC105369381 Gene.

No data available for External Links for LOC105369381 Gene

Products for LOC105369381 Gene

Sources for LOC105369381 Gene

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