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Aliases for LOC105369379 Gene

Subcategory (RNA class) for LOC105369379 Gene

ncRNA

Quality Score for this RNA gene is

13

Aliases for LOC105369379 Gene

  • Uncharacterized LOC105369379 3
  • AP003065.1 5

External Ids for LOC105369379 Gene

Previous GeneCards Identifiers for LOC105369379 Gene

  • GC11U902398

Summaries for LOC105369379 Gene

GeneCards Summary for LOC105369379 Gene

LOC105369379 (Uncharacterized LOC105369379) is an RNA Gene, and is affiliated with the ncRNA class.

Additional gene information for LOC105369379 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for LOC105369379 Gene

Genomics for LOC105369379 Gene

GeneHancer (GH) Regulatory Elements for LOC105369379 Gene

Promoters and enhancers for LOC105369379 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH11J072642 Promoter/Enhancer 1.6 Ensembl ENCODE dbSUPER 650.7 -0.2 -234 1.6 PKNOX1 CLOCK ATF1 SIN3A ZNF2 ETS1 GLIS2 ARID2 ZNF143 FOS LOC105369379 NUMA1 ZNF705E RNF121 LOC100128494 PDE2A GC11P072622
GH11J073138 Promoter/Enhancer 2.6 EPDnew FANTOM5 Ensembl ENCODE dbSUPER 14.6 +499.2 499231 7.4 MLX ZFP64 DMAP1 IRF4 YY1 SLC30A9 ZNF213 E2F8 ZNF143 MCM3 FCHSD2 ARPC3P4 LOC105369379 ENSG00000256739 ENSG00000255672 LOC220077 FAM168A LOC401703 CLPB PAAF1
GH11J073375 Promoter/Enhancer 2.6 EPDnew FANTOM5 Ensembl ENCODE dbSUPER 14.6 +739.6 739560 15 CLOCK DMAP1 IRF4 SLC30A9 E2F8 ZNF416 ZNF143 ZNF548 SP3 GLIS1 RELT ENSG00000206913 C2CD3 ARPC3P4 ARHGEF17 LOC105369379 ENSG00000256448 CLPB P4HA3-AS1 P4HA3
GH11J072811 Promoter/Enhancer 2.3 EPDnew Ensembl ENCODE dbSUPER 14.6 +171.0 170973 5.5 HDGF PKNOX1 CLOCK FOXA2 SMAD1 MLX ARNT ZFP64 ARID4B SIN3A ATG16L2 STARD10 ALG1L9P NUMA1 LOC100128494 LOC105369379 ENSG00000255672 ENSG00000256739 LOC220077 LOC401703
GH11J071927 Promoter/Enhancer 2.3 EPDnew Ensembl ENCODE dbSUPER 14.6 -713.4 -713403 5.5 HDGF HNRNPUL1 PKNOX1 CLOCK FOXA2 SMAD1 ARNT ARID4B SIN3A FEZF1 RNF121 LOC100133315 NUMA1 LOC100128494 ZNF705E IL18BP NADSYN1 FAM86C1 LOC220077 KRTAP5-13P
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LOC105369379 on UCSC Golden Path with GeneCards custom track

Genomic Locations for LOC105369379 Gene

Genomic Locations for LOC105369379 Gene
chr11:72,643,237-72,670,957
(GRCh38/hg38)
Size:
27,721 bases
Orientation:
Plus strand
chr11:72,354,281-72,370,451
(GRCh37/hg19)
Size:
16,171 bases
Orientation:
Plus strand

Genomic View for LOC105369379 Gene

Genes around LOC105369379 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC105369379 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC105369379 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC105369379 Gene

Proteins for LOC105369379 Gene

Post-translational modifications for LOC105369379 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC105369379 Gene

Domains & Families for LOC105369379 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for LOC105369379 Gene

Function for LOC105369379 Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC105369379 Gene

Localization for LOC105369379 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC105369379 Gene

Pathways & Interactions for LOC105369379 Gene

SuperPathways for LOC105369379 Gene

No Data Available

Interacting Proteins for LOC105369379 Gene

Gene Ontology (GO) - Biological Process for LOC105369379 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for LOC105369379 Gene

Drugs & Compounds for LOC105369379 Gene

No Compound Related Data Available

Transcripts for LOC105369379 Gene

mRNA/cDNA for LOC105369379 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :
(1) RNA Central transcripts :

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for LOC105369379 Gene

No ASD Table

Relevant External Links for LOC105369379 Gene

GeneLoc Exon Structure for
LOC105369379

Expression for LOC105369379 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC105369379 Gene

Orthologs for LOC105369379 Gene

Evolution for LOC105369379 Gene

ENSEMBL:
Gene Tree for LOC105369379 (if available)
TreeFam:
Gene Tree for LOC105369379 (if available)

No data available for Orthologs for LOC105369379 Gene

Paralogs for LOC105369379 Gene

No data available for Paralogs for LOC105369379 Gene

Variants for LOC105369379 Gene

Sequence variations from dbSNP and Humsavar for LOC105369379 Gene

SNP ID Clin Chr 11 pos Variation AA Info Type
rs1000775118 -- 72,668,100(+) C/T genic_downstream_transcript_variant, intron_variant
rs1000807691 -- 72,661,016(+) C/T intron_variant
rs1000859888 -- 72,660,769(+) C/T non_coding_transcript_variant
rs1000960424 -- 72,661,261(+) C/T intron_variant
rs1000976350 -- 72,667,019(+) T/C genic_downstream_transcript_variant, intron_variant

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC105369379 Gene

Disorders for LOC105369379 Gene

No disorders were found for LOC105369379 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC105369379 Gene

Publications for LOC105369379 Gene

No publications were found for LOC105369379 Gene.

Products for LOC105369379 Gene

Sources for LOC105369379 Gene

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