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Aliases for LOC105369379 Gene

Subcategory (RNA class) for LOC105369379 Gene

ncRNA

Quality Score for this RNA gene is

2

Aliases for LOC105369379 Gene

  • Uncharacterized LOC105369379 3
  • AP003065.1 5

External Ids for LOC105369379 Gene

Previous GeneCards Identifiers for LOC105369379 Gene

  • GC11U902398

Summaries for LOC105369379 Gene

GeneCards Summary for LOC105369379 Gene

LOC105369379 (Uncharacterized LOC105369379) is an RNA Gene, and is affiliated with the ncRNA class.

Additional gene information for LOC105369379 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for LOC105369379 Gene

Genomics for LOC105369379 Gene

GeneHancer (GH) Regulatory Elements for LOC105369379 Gene

Promoters and enhancers for LOC105369379 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH11I072642 Promoter/Enhancer 2.1 EPDnew Ensembl ENCODE dbSUPER 550.8 -0.2 -234 1.6 PKNOX1 CLOCK ATF1 SIN3A ZNF2 GLIS2 ARID2 ZNF143 FOS ATF7 PDE2A LOC105369379 NUMA1 ZNF705E RNF121 LOC100128494 GC11P072622
GH11I072616 Enhancer 0.7 ENCODE dbSUPER 11.8 -25.6 -25605 1.9 ZFHX2 GLIS1 ZFP36 ZMYM3 ZIC2 EZH2 EGR2 LOC105369379 PDE2A LOC105369378 LINC01537 ENSG00000256148 MIR139 RNU7-105P LOC105369377
GH11I072534 Enhancer 0.7 ENCODE 10.8 -107.6 -107628 2.4 CTCF MAX BACH1 RFX5 GTF3C2 GATA3 ZNF316 POLR3A SCRT2 NFE2 LOC105369376 LINC01537 LOC105369378 PDE2A LOC105369379 ARAP1-AS1 ARAP1 PHOX2A LOC100421204
GH11I072620 Enhancer 0.5 dbSUPER 12.7 -22.0 -22038 1.5 ZFHX2 CREB1 ATF2 EGR2 GC11P072622 RNU7-105P LOC105369379 PDE2A LOC105369378 LINC01537 ARAP1-AS1 ARAP1 STARD10 MIR139
GH11I072619 Enhancer 0.3 dbSUPER 11.9 -23.7 -23727 0.5 MNT LOC105369379 PDE2A LOC105369378 LINC01537 MIR139 RNU7-105P
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around LOC105369379 on UCSC Golden Path with GeneCards custom track

Genomic Locations for LOC105369379 Gene

Genomic Locations for LOC105369379 Gene
chr11:72,643,237-72,670,957
(GRCh38/hg38)
Size:
27,721 bases
Orientation:
Plus strand
chr11:72,354,281-72,370,451
(GRCh37/hg19)

Genomic View for LOC105369379 Gene

Genes around LOC105369379 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC105369379 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC105369379 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC105369379 Gene

Proteins for LOC105369379 Gene

Post-translational modifications for LOC105369379 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC105369379 Gene

Domains & Families for LOC105369379 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for LOC105369379 Gene

Function for LOC105369379 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC105369379 Gene

Localization for LOC105369379 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC105369379 Gene

Pathways & Interactions for LOC105369379 Gene

SuperPathways for LOC105369379 Gene

No Data Available

Interacting Proteins for LOC105369379 Gene

Gene Ontology (GO) - Biological Process for LOC105369379 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for LOC105369379 Gene

Drugs & Compounds for LOC105369379 Gene

No Compound Related Data Available

Transcripts for LOC105369379 Gene

mRNA/cDNA for LOC105369379 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for LOC105369379 Gene

No ASD Table

Relevant External Links for LOC105369379 Gene

GeneLoc Exon Structure for
LOC105369379

Expression for LOC105369379 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC105369379 Gene

Orthologs for LOC105369379 Gene

Evolution for LOC105369379 Gene

ENSEMBL:
Gene Tree for LOC105369379 (if available)
TreeFam:
Gene Tree for LOC105369379 (if available)

No data available for Orthologs for LOC105369379 Gene

Paralogs for LOC105369379 Gene

No data available for Paralogs for LOC105369379 Gene

Variants for LOC105369379 Gene

Sequence variations from dbSNP and Humsavar for LOC105369379 Gene

SNP ID Clin Chr 11 pos Variation AA Info Type
rs1000775118 -- 72,668,100(+) C/T genic_downstream_transcript_variant, intron_variant
rs1000807691 -- 72,661,016(+) C/T intron_variant
rs1000859888 -- 72,660,769(+) C/T non_coding_transcript_variant
rs1000960424 -- 72,661,261(+) C/T intron_variant
rs1000976350 -- 72,667,019(+) T/C genic_downstream_transcript_variant, intron_variant

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC105369379 Gene

Disorders for LOC105369379 Gene

No disorders were found for LOC105369379 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC105369379 Gene

Publications for LOC105369379 Gene

No publications were found for LOC105369379 Gene.

Products for LOC105369379 Gene

Sources for LOC105369379 Gene

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