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Aliases for LOC105369379 Gene

Subcategory (RNA class) for LOC105369379 Gene

ncRNA

Quality Score for this RNA gene is

13

Aliases for LOC105369379 Gene

  • Uncharacterized LOC105369379 3

External Ids for LOC105369379 Gene

Previous GeneCards Identifiers for LOC105369379 Gene

  • GC11U902398

Summaries for LOC105369379 Gene

GeneCards Summary for LOC105369379 Gene

LOC105369379 (Uncharacterized LOC105369379) is an RNA Gene, and is affiliated with the ncRNA class.

Additional gene information for LOC105369379 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for LOC105369379 Gene

Genomics for LOC105369379 Gene

GeneHancer (GH) Regulatory Elements for LOC105369379 Gene

Promoters and enhancers for LOC105369379 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH11J072656 Enhancer 0.5 Ensembl 600.7 -0.8 -775 1.4 RFX1 BMI1 ZKSCAN1 ADNP EGR2 LOC105369379 ARAP1 MIR139 ARAP1-AS1 RNU7-105P PDE2A ENSG00000255808
GH11J072652 Enhancer 1.2 Ensembl ENCODE dbSUPER 0.7 -4.3 -4276 2 CC2D1A CBFA2T2 CDC5L TRIM24 SMARCA4 MTA1 DPF2 IKZF1 RFX1 PKNOX1 PDE2A ARAP1 MIR139 ARAP1-AS1 RNU7-105P LOC105369379 ENSG00000255808
GH11J072674 Promoter/Enhancer 1.6 EPDnew Ensembl ENCODE 0.4 +15.6 15624 11 SP1 ZNF652 MAFK TFE3 MLLT1 EGR1 IKZF1 IKZF2 ZIC2 ZNF143 PDE2A NUMA1 ENSG00000254469 LOC100128494 ENSG00000257038 ARAP1 STARD10 FCHSD2 LOC105369379
GH11J072662 Enhancer 0.5 Ensembl 0.4 +6.7 6725 5.2 CTCF TRIM28 TCF7L2 BCOR ZNF768 GLIS1 ZMYM3 ARAP1 PDE2A STARD10 LOC105369379
GH11J072646 Enhancer 0.5 Ensembl dbSUPER 0.4 -11.3 -11275 0.4 SCRT2 ENSG00000255808 LOC105369379 PDE2A
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LOC105369379 on UCSC Golden Path with GeneCards custom track

Genomic Locations for LOC105369379 Gene

Genomic Locations for LOC105369379 Gene
chr11:72,658,076-72,670,957
(GRCh38/hg38)
Size:
12,882 bases
Orientation:
Plus strand

Genomic View for LOC105369379 Gene

Genes around LOC105369379 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC105369379 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC105369379 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC105369379 Gene

Proteins for LOC105369379 Gene

Post-translational modifications for LOC105369379 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC105369379 Gene

Domains & Families for LOC105369379 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for LOC105369379 Gene

Function for LOC105369379 Gene

Phenotypes From GWAS Catalog for LOC105369379 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC105369379 Gene

Localization for LOC105369379 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC105369379 Gene

Pathways & Interactions for LOC105369379 Gene

PathCards logo

SuperPathways for LOC105369379 Gene

No Data Available

Interacting Proteins for LOC105369379 Gene

Gene Ontology (GO) - Biological Process for LOC105369379 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for LOC105369379 Gene

Drugs & Compounds for LOC105369379 Gene

No Compound Related Data Available

Transcripts for LOC105369379 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for LOC105369379 Gene

No ASD Table

Relevant External Links for LOC105369379 Gene

GeneLoc Exon Structure for
LOC105369379

No data available for mRNA/cDNA for LOC105369379 Gene

Expression for LOC105369379 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC105369379 Gene

Orthologs for LOC105369379 Gene

No data available for Orthologs and Evolution for LOC105369379 Gene

Paralogs for LOC105369379 Gene

No data available for Paralogs for LOC105369379 Gene

Variants for LOC105369379 Gene

Sequence variations from dbSNP and Humsavar for LOC105369379 Gene

SNP ID Clin Chr 11 pos Variation AA Info Type
rs1000775118 -- 72,668,100(+) C/T genic_downstream_transcript_variant, intron_variant
rs1000807691 -- 72,661,016(+) C/T intron_variant
rs1000859888 -- 72,660,769(+) C/T non_coding_transcript_variant
rs1000960424 -- 72,661,261(+) C/T intron_variant
rs1000976350 -- 72,667,019(+) T/C genic_downstream_transcript_variant, intron_variant

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC105369379 Gene

Disorders for LOC105369379 Gene

No disorders were found for LOC105369379 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC105369379 Gene

Publications for LOC105369379 Gene

No publications were found for LOC105369379 Gene.

No data available for External Links for LOC105369379 Gene

Products for LOC105369379 Gene

Sources for LOC105369379 Gene

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