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Aliases for LOC105369349 Gene

Subcategory (RNA class) for LOC105369349 Gene

ncRNA

Quality Score for this RNA gene is

13

Aliases for LOC105369349 Gene

  • Uncharacterized LOC105369349 3

External Ids for LOC105369349 Gene

Previous GeneCards Identifiers for LOC105369349 Gene

  • GC11U902371

Summaries for LOC105369349 Gene

GeneCards Summary for LOC105369349 Gene

LOC105369349 (Uncharacterized LOC105369349) is an RNA Gene, and is affiliated with the ncRNA class.

Additional gene information for LOC105369349 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for LOC105369349 Gene

Genomics for LOC105369349 Gene

GeneHancer (GH) Regulatory Elements for LOC105369349 Gene

Promoters and enhancers for LOC105369349 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH11J065922 Enhancer 0.2 Ensembl 600.7 -0.2 -163 0.4 LOC105369349 CST6 DRAP1
GH11J065927 Enhancer 1.1 FANTOM5 ENCODE 0.4 +5.7 5681 2.4 SP1 ZNF148 MLLT1 ZNF687 CDC5L SMARCA4 MTA1 IKZF1 POLR2A GMEB1 EIF1AD CST6 CCDC85B FIBP CTSW SART1 FOSL1 CFL1 MUS81 BANF1
GH11J065940 Enhancer 0.9 ENCODE 0.4 +18.8 18804 2 CC2D1A CBFA2T2 TRIM24 CREM ZNF639 EGR1 SMARCA4 MTA1 IKZF1 GMEB1 SART1 DRAP1 C11orf68 FOSL1 CCDC85B FIBP CTSW EFEMP2 EIF1AD BANF1
GH11J065932 Enhancer 0.6 ENCODE 0.4 +10.1 10131 0.1 CBFA2T2 ZBTB33 CREB1 REST CTCF USF1 USF2 GLIS1 ATF2 LARP7 FIBP CCDC85B CTSW FOSL1 SART1 CFL1 MUS81 SNX32 PACS1 ENSG00000255320
GH11J065934 Enhancer 0.6 Ensembl 0.4 +12.1 12137 0.6 CEBPG DPF2 CEBPA SOX6 ZBTB11 TRIM24 CUX1 CEBPB TCF12 VEZF1 CCDC85B FIBP CTSW FOSL1 SART1 CFL1 MUS81 SNX32 PACS1 ENSG00000255320
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LOC105369349 on UCSC Golden Path with GeneCards custom track

Genomic Locations for LOC105369349 Gene

Genomic Locations for LOC105369349 Gene
chr11:65,922,564-65,929,479
(GRCh38/hg38)
Size:
6,916 bases
Orientation:
Plus strand

Genomic View for LOC105369349 Gene

Genes around LOC105369349 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC105369349 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC105369349 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC105369349 Gene

Proteins for LOC105369349 Gene

Post-translational modifications for LOC105369349 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC105369349 Gene

Domains & Families for LOC105369349 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for LOC105369349 Gene

Function for LOC105369349 Gene

Phenotypes From GWAS Catalog for LOC105369349 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC105369349 Gene

Localization for LOC105369349 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC105369349 Gene

Pathways & Interactions for LOC105369349 Gene

PathCards logo

SuperPathways for LOC105369349 Gene

No Data Available

Interacting Proteins for LOC105369349 Gene

Gene Ontology (GO) - Biological Process for LOC105369349 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for LOC105369349 Gene

Drugs & Compounds for LOC105369349 Gene

No Compound Related Data Available

Transcripts for LOC105369349 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for LOC105369349 Gene

No ASD Table

Relevant External Links for LOC105369349 Gene

GeneLoc Exon Structure for
LOC105369349

No data available for mRNA/cDNA for LOC105369349 Gene

Expression for LOC105369349 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC105369349 Gene

Orthologs for LOC105369349 Gene

No data available for Orthologs and Evolution for LOC105369349 Gene

Paralogs for LOC105369349 Gene

No data available for Paralogs for LOC105369349 Gene

Variants for LOC105369349 Gene

Sequence variations from dbSNP and Humsavar for LOC105369349 Gene

SNP ID Clin Chr 11 pos Variation AA Info Type
rs1000276611 -- 65,928,032(+) G/A intron_variant
rs1000310071 -- 65,922,298(+) G/A/C upstream_transcript_variant
rs1000508303 -- 65,921,606(+) C/G upstream_transcript_variant
rs1000610604 -- 65,926,896(+) G/A intron_variant
rs1000752320 -- 65,922,981(+) C/T intron_variant

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC105369349 Gene

Disorders for LOC105369349 Gene

No disorders were found for LOC105369349 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC105369349 Gene

Publications for LOC105369349 Gene

No publications were found for LOC105369349 Gene.

No data available for External Links for LOC105369349 Gene

Products for LOC105369349 Gene

Sources for LOC105369349 Gene

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