Free for academic non-profit institutions. Other users need a Commercial license

Aliases for LOC105369329 Gene

Subcategory (RNA class) for LOC105369329 Gene

ncRNA

Quality Score for this RNA gene is

13

Aliases for LOC105369329 Gene

  • Uncharacterized LOC105369329 3

External Ids for LOC105369329 Gene

Previous GeneCards Identifiers for LOC105369329 Gene

  • GC11U902321

Summaries for LOC105369329 Gene

GeneCards Summary for LOC105369329 Gene

LOC105369329 (Uncharacterized LOC105369329) is an RNA Gene, and is affiliated with the ncRNA class.

Additional gene information for LOC105369329 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for LOC105369329 Gene

Genomics for LOC105369329 Gene

GeneHancer (GH) Regulatory Elements for LOC105369329 Gene

Promoters and enhancers for LOC105369329 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH11J061495 Enhancer 0.7 Ensembl 600.7 +0.2 190 1.8 CBFA2T2 GTF2F1 TARDBP MNT FOXA1 YBX1 CREB1 MLLT1 ZNF207 POLR2A ENSG00000255931 LOC105369329 TMEM216 MIR4488
GH11J061494 Enhancer 0.7 Ensembl ENCODE 600.7 -1.6 -1611 1.4 ZNF652 ZNF24 NR2F2 ZFP91 RXRA ENSG00000255931 LOC105369329 TMEM216 PPP1R32
GH11J061498 Enhancer 1.2 FANTOM5 Ensembl ENCODE 0.7 +3.4 3390 2.2 GTF2F1 CDC5L EGR1 POLR2A GABPA ETV6 NR2C1 MTA3 EHMT2 ZBED1 TMEM216 DDB1 TKFC LRRC10B ENSG00000255931 LOC105369329 MIR4488
GH11J061487 Promoter/Enhancer 1.6 Ensembl ENCODE dbSUPER 0.4 -7.4 -7351 3.7 CEBPG TFE3 POLR2A SP1 SP5 KAT8 CREB1 RXRA NRF1 ZIC2 FADS1 SLC15A3 PPP1R32 LOC105369329 GC11P061443
GH11J061480 Promoter/Enhancer 1.4 EPDnew Ensembl ENCODE 0.4 -14.2 -14210 3 CTCF CSDE1 RFX1 ZBTB33 NRF1 RFX3 BMI1 ZBTB2 MYNN NFIC PPP1R32 TMEM216 LOC105369329 GC11P061443 ENSG00000256591
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LOC105369329 on UCSC Golden Path with GeneCards custom track

Genomic Locations for LOC105369329 Gene

Genomic Locations for LOC105369329 Gene
chr11:61,496,311-61,506,649
(GRCh38/hg38)
Size:
10,339 bases
Orientation:
Plus strand

Genomic View for LOC105369329 Gene

Genes around LOC105369329 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC105369329 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC105369329 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC105369329 Gene

Proteins for LOC105369329 Gene

Post-translational modifications for LOC105369329 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC105369329 Gene

Domains & Families for LOC105369329 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for LOC105369329 Gene

Function for LOC105369329 Gene

Phenotypes From GWAS Catalog for LOC105369329 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC105369329 Gene

Localization for LOC105369329 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC105369329 Gene

Pathways & Interactions for LOC105369329 Gene

PathCards logo

SuperPathways for LOC105369329 Gene

No Data Available

Interacting Proteins for LOC105369329 Gene

Gene Ontology (GO) - Biological Process for LOC105369329 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for LOC105369329 Gene

Drugs & Compounds for LOC105369329 Gene

No Compound Related Data Available

Transcripts for LOC105369329 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for LOC105369329 Gene

No ASD Table

Relevant External Links for LOC105369329 Gene

GeneLoc Exon Structure for
LOC105369329

No data available for mRNA/cDNA for LOC105369329 Gene

Expression for LOC105369329 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC105369329 Gene

Orthologs for LOC105369329 Gene

No data available for Orthologs and Evolution for LOC105369329 Gene

Paralogs for LOC105369329 Gene

No data available for Paralogs for LOC105369329 Gene

Variants for LOC105369329 Gene

Sequence variations from dbSNP and Humsavar for LOC105369329 Gene

SNP ID Clin Chr 11 pos Variation AA Info Type
rs1000099943 -- 61,498,208(+) G/A upstream_transcript_variant
rs1000235273 -- 61,505,859(+) G/A non_coding_transcript_variant
rs1000413658 -- 61,497,900(+) T/A upstream_transcript_variant
rs1000845587 -- 61,503,030(+) T/G intron_variant
rs1000949246 -- 61,497,047(+) G/A upstream_transcript_variant

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC105369329 Gene

Disorders for LOC105369329 Gene

No disorders were found for LOC105369329 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC105369329 Gene

Publications for LOC105369329 Gene

No publications were found for LOC105369329 Gene.

No data available for External Links for LOC105369329 Gene

Products for LOC105369329 Gene

Sources for LOC105369329 Gene

Content
Loading form....