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Aliases for LOC105369325 Gene

Subcategory (RNA class) for LOC105369325 Gene

ncRNA

Quality Score for this RNA gene is

13

Aliases for LOC105369325 Gene

  • Uncharacterized LOC105369325 3

External Ids for LOC105369325 Gene

Previous GeneCards Identifiers for LOC105369325 Gene

  • GC11U902379

Summaries for LOC105369325 Gene

GeneCards Summary for LOC105369325 Gene

LOC105369325 (Uncharacterized LOC105369325) is an RNA Gene, and is affiliated with the ncRNA class.

Additional gene information for LOC105369325 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for LOC105369325 Gene

Genomics for LOC105369325 Gene

GeneHancer (GH) Regulatory Elements for LOC105369325 Gene

Promoters and enhancers for LOC105369325 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH11J061090 Enhancer 1.1 FANTOM5 ENCODE dbSUPER 600.7 +0.2 208 2.8 SP1 ZNF148 RELA CREM MLLT1 IKZF1 POLR2A DPF2 IKZF2 PKNOX1 LOC105369325 CD5 VPS37C RNU6-933P CPSF7 ENSG00000256733
GH11J061087 Enhancer 0.6 Ensembl dbSUPER 0.7 +4.0 4040 1.2 CREB1 ATF2 VPS37C CD6 LOC105369325 ENSG00000256733
GH11J061070 Enhancer 1 ENCODE dbSUPER 0.3 +20.6 20552 3.6 ZFX ZNF121 ZNF687 MLLT1 SMARCA4 IKZF1 IKZF2 LARP7 ZNF740 PKNOX1 CD5 CD6 ENSG00000256733 LOC105369325
GH11J061097 Enhancer 0.7 Ensembl 0.4 -6.6 -6560 2.4 IKZF1 NFRKB FOXK2 ZNF747 TSC22D4 ZKSCAN1 FOXA1 YBX1 ARNT MLLT1 CPSF7 TMEM138 TMEM109 RN7SL23P CD6 BEST1 CYB561A3 VPS37C TMEM216 CD5
GH11J061060 Enhancer 1 ENCODE dbSUPER 0.3 +31.0 30978 1.8 SP1 RELA CREM MLLT1 ZBED1 IKZF1 CREB1 BACH1 IKZF2 TRIM22 ENSG00000256733 LOC105369325
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LOC105369325 on UCSC Golden Path with GeneCards custom track

Genomic Locations for LOC105369325 Gene

Genomic Locations for LOC105369325 Gene
chr11:61,029,759-61,092,441
(GRCh38/hg38)
Size:
62,683 bases
Orientation:
Minus strand

Genomic View for LOC105369325 Gene

Genes around LOC105369325 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC105369325 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC105369325 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC105369325 Gene

Proteins for LOC105369325 Gene

Post-translational modifications for LOC105369325 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC105369325 Gene

Domains & Families for LOC105369325 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for LOC105369325 Gene

Function for LOC105369325 Gene

Phenotypes From GWAS Catalog for LOC105369325 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC105369325 Gene

Localization for LOC105369325 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC105369325 Gene

Pathways & Interactions for LOC105369325 Gene

PathCards logo

SuperPathways for LOC105369325 Gene

No Data Available

Interacting Proteins for LOC105369325 Gene

Gene Ontology (GO) - Biological Process for LOC105369325 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for LOC105369325 Gene

Drugs & Compounds for LOC105369325 Gene

No Compound Related Data Available

Transcripts for LOC105369325 Gene

mRNA/cDNA for LOC105369325 Gene

(1) Additional mRNA sequences :

Alternative Splicing Database (ASD) splice patterns (SP) for LOC105369325 Gene

No ASD Table

Relevant External Links for LOC105369325 Gene

GeneLoc Exon Structure for
LOC105369325

Expression for LOC105369325 Gene

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC105369325 Gene

Orthologs for LOC105369325 Gene

No data available for Orthologs and Evolution for LOC105369325 Gene

Paralogs for LOC105369325 Gene

No data available for Paralogs for LOC105369325 Gene

Variants for LOC105369325 Gene

Sequence variations from dbSNP and Humsavar for LOC105369325 Gene

SNP ID Clin Chr 11 pos Variation AA Info Type
rs1000009601 -- 61,047,053(-) A/C/G genic_upstream_transcript_variant, intron_variant, upstream_transcript_variant
rs1000031481 -- 61,029,044(-) T/C non_coding_transcript_variant
rs1000043035 -- 61,041,486(-) G/T intron_variant
rs1000063579 -- 61,083,692(-) T/C genic_upstream_transcript_variant, intron_variant
rs1000097324 -- 61,068,477(-) T/G genic_upstream_transcript_variant, intron_variant

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC105369325 Gene

Disorders for LOC105369325 Gene

No disorders were found for LOC105369325 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC105369325 Gene

Publications for LOC105369325 Gene

No publications were found for LOC105369325 Gene.

No data available for External Links for LOC105369325 Gene

Products for LOC105369325 Gene

Sources for LOC105369325 Gene

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