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Aliases for LOC105369312 Gene

Subcategory (RNA class) for LOC105369312 Gene

ncRNA

Quality Score for this RNA gene is

13

Aliases for LOC105369312 Gene

  • Uncharacterized LOC105369312 3

External Ids for LOC105369312 Gene

Previous GeneCards Identifiers for LOC105369312 Gene

  • GC11U902352

Summaries for LOC105369312 Gene

GeneCards Summary for LOC105369312 Gene

LOC105369312 (Uncharacterized LOC105369312) is an RNA Gene, and is affiliated with the ncRNA class.

Additional gene information for LOC105369312 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for LOC105369312 Gene

Genomics for LOC105369312 Gene

GeneHancer (GH) Regulatory Elements for LOC105369312 Gene

Promoters and enhancers for LOC105369312 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH11J057402 Enhancer 1.6 FANTOM5 Ensembl ENCODE dbSUPER 600.7 -0.8 -840 5.9 CC2D1A CBFA2T2 ZNF687 TRIM24 RELA CREM PRDM1 SMARCA4 MTA1 IKZF1 LOC105369312 SLC43A3 P2RX3 RN7SKP259 RTN4RL2 SSRP1 PRG2 TIMM10 UBE2L6 ZDHHC5
GH11J057395 Enhancer 1.2 Ensembl dbSUPER 0.4 +6.9 6854 5.4 ELF3 CBFA2T2 CEBPG TRIM24 PRDM1 ZNF644 ZNF639 SMARCA4 KAT8 HMG20B SSRP1 SLC43A3 P2RX3 CLP1 PRG2 ENSG00000254979 RN7SKP259 RTN4RL2 TIMM10 ENSG00000254662
GH11J057390 Promoter/Enhancer 1 EPDnew Ensembl 0.4 +12.3 12254 3.8 ZNF24 EP300 CTBP1 ZKSCAN1 DPF2 IKZF1 POLR2A PRG2 TIMM10 P2RX3 ENSG00000254979 SLC43A3 RN7SKP259 RTN4RL2 TNKS1BP1 ENSG00000254662 SSRP1
GH11J057408 Enhancer 0.4 ENCODE 0.7 -4.5 -4476 0.4 ADNP ZBTB33 GC11M058195 RN7SKP259 RTN4RL2 SSRP1 P2RX3 PRG2 LOC105369312 ENSG00000254979 SLC43A3
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LOC105369312 on UCSC Golden Path with GeneCards custom track

Genomic Locations for LOC105369312 Gene

Genomic Locations for LOC105369312 Gene
chr11:57,392,990-57,404,155
(GRCh38/hg38)
Size:
11,166 bases
Orientation:
Minus strand

Genomic View for LOC105369312 Gene

Genes around LOC105369312 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC105369312 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC105369312 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC105369312 Gene

Proteins for LOC105369312 Gene

Post-translational modifications for LOC105369312 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC105369312 Gene

Domains & Families for LOC105369312 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for LOC105369312 Gene

Function for LOC105369312 Gene

Phenotypes From GWAS Catalog for LOC105369312 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC105369312 Gene

Localization for LOC105369312 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC105369312 Gene

Pathways & Interactions for LOC105369312 Gene

PathCards logo

SuperPathways for LOC105369312 Gene

No Data Available

Interacting Proteins for LOC105369312 Gene

Gene Ontology (GO) - Biological Process for LOC105369312 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for LOC105369312 Gene

Drugs & Compounds for LOC105369312 Gene

No Compound Related Data Available

Transcripts for LOC105369312 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for LOC105369312 Gene

No ASD Table

Relevant External Links for LOC105369312 Gene

GeneLoc Exon Structure for
LOC105369312

No data available for mRNA/cDNA for LOC105369312 Gene

Expression for LOC105369312 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC105369312 Gene

Orthologs for LOC105369312 Gene

No data available for Orthologs and Evolution for LOC105369312 Gene

Paralogs for LOC105369312 Gene

No data available for Paralogs for LOC105369312 Gene

Variants for LOC105369312 Gene

Sequence variations from dbSNP and Humsavar for LOC105369312 Gene

SNP ID Clin Chr 11 pos Variation AA Info Type
rs1000120504 -- 57,399,448(-) G/T non_coding_transcript_variant
rs1000242270 -- 57,394,060(-) C/A non_coding_transcript_variant
rs1000397851 -- 57,403,639(-) A/G intron_variant
rs1000407705 -- 57,403,755(-) C/T intron_variant
rs1000639517 -- 57,399,657(-) A/G intron_variant

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC105369312 Gene

Disorders for LOC105369312 Gene

No disorders were found for LOC105369312 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC105369312 Gene

Publications for LOC105369312 Gene

No publications were found for LOC105369312 Gene.

No data available for External Links for LOC105369312 Gene

Products for LOC105369312 Gene

Sources for LOC105369312 Gene

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