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Aliases for LOC105369306 Gene

Subcategory (RNA class) for LOC105369306 Gene

ncRNA

Quality Score for this RNA gene is

13

Aliases for LOC105369306 Gene

  • Uncharacterized LOC105369306 3

External Ids for LOC105369306 Gene

Previous GeneCards Identifiers for LOC105369306 Gene

  • GC21U900671

Summaries for LOC105369306 Gene

GeneCards Summary for LOC105369306 Gene

LOC105369306 (Uncharacterized LOC105369306) is an RNA Gene, and is affiliated with the ncRNA class.

Additional gene information for LOC105369306 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for LOC105369306 Gene

Genomics for LOC105369306 Gene

GeneHancer (GH) Regulatory Elements for LOC105369306 Gene

Promoters and enhancers for LOC105369306 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH21J036103 Promoter/Enhancer 1.3 Ensembl ENCODE dbSUPER 600.7 +1.3 1334 3.7 SP1 CTCF PRDM1 ZBTB33 PKNOX1 RAD21 ZNF143 FOS POLR2A ENSG00000233393 LOC105369306 SETD4 DOP1B CBR3 LOC100133286 ENSG00000236677 RUNX1 LINC01436
GH21J036104 Enhancer 0.3 ENCODE 600.7 -0.8 -836 0.2 ZFP91 ENSG00000233393 LOC105369306 LOC100133286 SETD4 ENSG00000236119
GH21J036095 Enhancer 1.2 Ensembl ENCODE dbSUPER 0.4 -6.1 -6134 6.6 CBFA2T2 SP7 SMARCA4 IKZF1 PKNOX1 ZNF600 IKZF2 ZNF512 ZIC2 ZNF629 LINC01436 SETD4 DOP1B LOC100133286 CBR1 RNU6-992P ENSG00000236677 ENSG00000233393 CBR3 LOC105369306
GH21J036087 Enhancer 0.9 Ensembl ENCODE dbSUPER 0.4 -16.8 -16792 1.2 SCRT2 NFE2 ATF2 FEZF1 CTCF HLF LINC01436 CBR1 ENSG00000236677 ENSG00000236119 LOC105369306 LOC100133286
GH21J036091 Enhancer 0.2 Ensembl 0.4 -12.6 -12633 0.8 CBR1 RNU6-992P ENSG00000236677 ENSG00000236119 LOC105369306 LOC100133286
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LOC105369306 on UCSC Golden Path with GeneCards custom track

Genomic Locations for LOC105369306 Gene

Genomic Locations for LOC105369306 Gene
chr21:36,104,434-36,109,692
(GRCh38/hg38)
Size:
5,259 bases
Orientation:
Plus strand

Genomic View for LOC105369306 Gene

Genes around LOC105369306 on UCSC Golden Path with GeneCards custom track

LOC105369306 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC105369306 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC105369306 Gene

No data available for Cytogenetic band for LOC105369306 Gene

Proteins for LOC105369306 Gene

Post-translational modifications for LOC105369306 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC105369306 Gene

Domains & Families for LOC105369306 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for LOC105369306 Gene

Function for LOC105369306 Gene

Phenotypes From GWAS Catalog for LOC105369306 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC105369306 Gene

Localization for LOC105369306 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC105369306 Gene

Pathways & Interactions for LOC105369306 Gene

PathCards logo

SuperPathways for LOC105369306 Gene

No Data Available

Interacting Proteins for LOC105369306 Gene

Gene Ontology (GO) - Biological Process for LOC105369306 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for LOC105369306 Gene

Drugs & Compounds for LOC105369306 Gene

No Compound Related Data Available

Transcripts for LOC105369306 Gene

mRNA/cDNA for LOC105369306 Gene

(1) Additional mRNA sequences :
(1) RNA Central transcripts :

Alternative Splicing Database (ASD) splice patterns (SP) for LOC105369306 Gene

No ASD Table

Relevant External Links for LOC105369306 Gene

GeneLoc Exon Structure for
LOC105369306

Expression for LOC105369306 Gene

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC105369306 Gene

Orthologs for LOC105369306 Gene

No data available for Orthologs and Evolution for LOC105369306 Gene

Paralogs for LOC105369306 Gene

No data available for Paralogs for LOC105369306 Gene

Variants for LOC105369306 Gene

Sequence variations from dbSNP and Humsavar for LOC105369306 Gene

SNP ID Clin Chr 21 pos Variation AA Info Type
rs1000755771 -- 36,105,332(+) T/C intron_variant
rs1000766196 -- 36,109,989(+) G/A downstream_transcript_variant
rs1000848112 -- 36,105,447(+) G/C intron_variant
rs1000900219 -- 36,105,667(+) G/C/T intron_variant
rs1001450405 -- 36,107,276(+) A/G intron_variant

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC105369306 Gene

Disorders for LOC105369306 Gene

No disorders were found for LOC105369306 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC105369306 Gene

Publications for LOC105369306 Gene

  1. Complete sequencing and characterization of 21,243 full-length human cDNAs. (PMID: 14702039) Ota T … Sugano S (Nature genetics 2004) 3 58

No data available for External Links for LOC105369306 Gene

Products for LOC105369306 Gene

Sources for LOC105369306 Gene

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