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Aliases for LOC105369299 Gene

Subcategory (RNA class) for LOC105369299 Gene

ncRNA

Quality Score for this RNA gene is

13

Aliases for LOC105369299 Gene

  • Uncharacterized LOC105369299 3

External Ids for LOC105369299 Gene

Previous GeneCards Identifiers for LOC105369299 Gene

  • GC21U900663

Summaries for LOC105369299 Gene

GeneCards Summary for LOC105369299 Gene

LOC105369299 (Uncharacterized LOC105369299) is an RNA Gene, and is affiliated with the ncRNA class.

Additional gene information for LOC105369299 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for LOC105369299 Gene

Genomics for LOC105369299 Gene

GeneHancer (GH) Regulatory Elements for LOC105369299 Gene

Promoters and enhancers for LOC105369299 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH21J029298 Promoter/Enhancer 2.3 EPDnew Ensembl ENCODE dbSUPER 600.7 -1.9 -1871 6.3 ZNF473 SP1 ELF3 ZFX CBFA2T2 ZNF148 NKRF MLLT1 POLR2A GTF2F1 LOC105369299 BACH1 ENSG00000231125 RPL23P2 USP16 LTN1 RPL12P9 N6AMT1 GC21P029305 GC21P029306
GH21J029296 Enhancer 0.6 FANTOM5 600.7 +1.8 1754 0.4 SP1 ZNF24 ZBTB20 RUNX3 ZFP64 ATF2 ZBTB33 HNF4A LOC105369299 BACH1 GC21M029248 GRIK1-AS2
GH21J029305 Promoter/Enhancer 1 Ensembl dbSUPER 0.4 -5.6 -5605 0.2 CC2D1A MLLT1 DPF2 ZFP91 ZBTB33 GC21P029305 GC21P029306 LOC105369299 BACH1 GRIK1-AS2
GH21J029294 Enhancer 0.6 ENCODE 0.7 +3.4 3413 1.3 RELA PRDM1 MZF1 ZNF680 IKZF1 IKZF2 ZNF143 ZNF140 RUNX3 TRIM28 ENSG00000231125 RPL23P2 USP16 LTN1 RPL12P9 LOC105369299 GC21M029248 BACH1 GRIK1-AS2
GH21J029293 Enhancer 0.8 ENCODE dbSUPER 0.4 +5.0 5011 0.2 ZNF687 BACH1 IKZF2 PKNOX1 DPF2 RUNX3 ELF1 BCL11A EBF1 ATF2 GC21M029248 LOC105369299 BACH1 GRIK1-AS2
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LOC105369299 on UCSC Golden Path with GeneCards custom track

Genomic Locations for LOC105369299 Gene

Genomic Locations for LOC105369299 Gene
chr21:29,296,165-29,298,696
(GRCh38/hg38)
Size:
2,532 bases
Orientation:
Minus strand

Genomic View for LOC105369299 Gene

Genes around LOC105369299 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC105369299 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC105369299 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC105369299 Gene

Proteins for LOC105369299 Gene

Post-translational modifications for LOC105369299 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC105369299 Gene

Domains & Families for LOC105369299 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for LOC105369299 Gene

Function for LOC105369299 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC105369299 Gene

Localization for LOC105369299 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC105369299 Gene

Pathways & Interactions for LOC105369299 Gene

PathCards logo

SuperPathways for LOC105369299 Gene

No Data Available

Interacting Proteins for LOC105369299 Gene

Gene Ontology (GO) - Biological Process for LOC105369299 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for LOC105369299 Gene

Drugs & Compounds for LOC105369299 Gene

No Compound Related Data Available

Transcripts for LOC105369299 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for LOC105369299 Gene

No ASD Table

Relevant External Links for LOC105369299 Gene

GeneLoc Exon Structure for
LOC105369299

No data available for mRNA/cDNA for LOC105369299 Gene

Expression for LOC105369299 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC105369299 Gene

Orthologs for LOC105369299 Gene

No data available for Orthologs and Evolution for LOC105369299 Gene

Paralogs for LOC105369299 Gene

No data available for Paralogs for LOC105369299 Gene

Variants for LOC105369299 Gene

Sequence variations from dbSNP and Humsavar for LOC105369299 Gene

SNP ID Clin Chr 21 pos Variation AA Info Type
rs1001498413 -- 29,296,026(-) C/A/T downstream_transcript_variant
rs1003115871 -- 29,297,561(-) C/G/T upstream_transcript_variant
rs1003406677 -- 29,298,769(-) G/C upstream_transcript_variant
rs1004126966 -- 29,296,816(-) A/G non_coding_transcript_variant
rs1005956385 -- 29,297,093(-) G/A upstream_transcript_variant

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC105369299 Gene

Disorders for LOC105369299 Gene

No disorders were found for LOC105369299 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC105369299 Gene

Publications for LOC105369299 Gene

No publications were found for LOC105369299 Gene.

No data available for External Links for LOC105369299 Gene

Products for LOC105369299 Gene

Sources for LOC105369299 Gene

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