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Aliases for LOC105369289 Gene

Subcategory (RNA class) for LOC105369289 Gene

ncRNA

Quality Score for this RNA gene is

13

Aliases for LOC105369289 Gene

  • Uncharacterized LOC105369289 3

External Ids for LOC105369289 Gene

Previous GeneCards Identifiers for LOC105369289 Gene

  • GC09U902430

Summaries for LOC105369289 Gene

GeneCards Summary for LOC105369289 Gene

LOC105369289 (Uncharacterized LOC105369289) is an RNA Gene, and is affiliated with the ncRNA class.

Additional gene information for LOC105369289 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for LOC105369289 Gene

Genomics for LOC105369289 Gene

GeneHancer (GH) Regulatory Elements for LOC105369289 Gene

Promoters and enhancers for LOC105369289 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH09J026670 Enhancer 0.7 Ensembl ENCODE 0.4 -6.0 -6034 1.4 POLR2A ZBTB44 ZNF335 EGR2 LOC105369289 ENSG00000279256
GH09J026677 Enhancer 0.4 Ensembl 0.7 +2.1 2066 1.6 ZBTB20 ZNF558 LOC105369289 LOC105376000
GH09J026680 Enhancer 0.6 Ensembl 0.4 +5.4 5366 1.4 ZEB2 ZNF157 OSR2 ZNF580 PRDM4 OVOL3 FEZF1 ZNF843 LOC105369289 LOC105376000
GH09J026682 Enhancer 0.5 Ensembl 0.4 +7.2 7166 1 PRDM10 ZSCAN5C ZBTB17 ZNF213 FEZF1 LOC105369289 LOC105376000
GH09J026723 Enhancer 0.8 Ensembl ENCODE 0.3 +47.6 47566 1.4 CTCF RFX1 PRDM4 ZNF189 RFX5 ZNF143 SIN3A XRCC5 PRDM6 RAD21 LOC105376000 IFT74 LOC105369289
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LOC105369289 on UCSC Golden Path with GeneCards custom track

Genomic Locations for LOC105369289 Gene

Genomic Locations for LOC105369289 Gene
chr9:26,676,135-26,681,023
(GRCh38/hg38)
Size:
4,889 bases
Orientation:
Plus strand

Genomic View for LOC105369289 Gene

Genes around LOC105369289 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC105369289 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC105369289 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC105369289 Gene

Proteins for LOC105369289 Gene

Post-translational modifications for LOC105369289 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC105369289 Gene

Domains & Families for LOC105369289 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for LOC105369289 Gene

Function for LOC105369289 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC105369289 Gene

Localization for LOC105369289 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC105369289 Gene

Pathways & Interactions for LOC105369289 Gene

PathCards logo

SuperPathways for LOC105369289 Gene

No Data Available

Interacting Proteins for LOC105369289 Gene

Gene Ontology (GO) - Biological Process for LOC105369289 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for LOC105369289 Gene

Drugs & Compounds for LOC105369289 Gene

No Compound Related Data Available

Transcripts for LOC105369289 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for LOC105369289 Gene

No ASD Table

Relevant External Links for LOC105369289 Gene

GeneLoc Exon Structure for
LOC105369289

No data available for mRNA/cDNA for LOC105369289 Gene

Expression for LOC105369289 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC105369289 Gene

Orthologs for LOC105369289 Gene

No data available for Orthologs and Evolution for LOC105369289 Gene

Paralogs for LOC105369289 Gene

No data available for Paralogs for LOC105369289 Gene

Variants for LOC105369289 Gene

Sequence variations from dbSNP and Humsavar for LOC105369289 Gene

SNP ID Clin Chr 09 pos Variation AA Info Type
rs1000499749 -- 26,680,806(+) C/T intron_variant
rs1000641943 -- 26,675,352(+) G/T upstream_transcript_variant
rs1000762915 -- 26,676,666(+) A/G intron_variant
rs1000970079 -- 26,676,750(+) A/G non_coding_transcript_variant
rs1002189762 -- 26,677,427(+) C/T intron_variant

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC105369289 Gene

Disorders for LOC105369289 Gene

No disorders were found for LOC105369289 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC105369289 Gene

Publications for LOC105369289 Gene

No publications were found for LOC105369289 Gene.

No data available for External Links for LOC105369289 Gene

Products for LOC105369289 Gene

Sources for LOC105369289 Gene

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