Aliases for LOC105369266 Gene

Data sources for LOC105369266 Gene:

RNA type for LOC105369266 Gene

lncRNA

Aliases for LOC105369266 Gene

External Ids for LOC105369266 Gene

Previous GeneCards Identifiers for LOC105369266 Gene

  • GC16U902128
  • GC16M033329

Summaries for LOC105369266 Gene

GeneCards Summary for LOC105369266 Gene

LOC105369266 (Uncharacterized LOC105369266) is an RNA Gene, and is affiliated with the lncRNA class.

Additional gene information for LOC105369266 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for LOC105369266 Gene

Genomics for LOC105369266 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for LOC105369266 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH16J033987 Enhancer 0.2 Ensembl 0.3 +28.8 28811 0.4 BCAP31P1 piR-34111-002 ENSG00000198555 LOC105369266 IGHV3OR16-17 LOC102724485
GH16J033964 Enhancer 0.2 Ensembl 0.2 +50.1 50111 1 ENSG00000270401 HSALNG0111032 LOC105369183 ENSG00000205452 LOC105369266 IGHV3OR16-17 LOC102724485
GH16J033707 Enhancer 0.7 FANTOM5 0.1 +308.7 308735 0.1 SUPT5H SMARCA4 EGR1 NRF1 L3MBTL2 MEIS2 PHF20 CTCF ZNF24 RNF2 BMS1P8 HSALNG0111014 piR-59382-005 piR-55364-007 lnc-TP53TG3F-10 IGHV3OR16-17 TP53TG3F LOC105369266
GH16J033920 Enhancer 0.2 Ensembl 0.2 +95.0 95002 0.4 piR-36428-003 piR-35871-003 ARHGAP23P1 IGHV3OR16-17 LOC105369266 LOC102724485
GH16J033655 Enhancer 0.5 ENCODE 0 +359.6 359573 0.1 ZNF654 REST TRIM22 SMARCA5 SKIL RAD21 CTCF RFX1 piR-40110-238 piR-48810-004 IGHV3OR16-17 TP53TG3F LOC105369266
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LOC105369266 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for LOC105369266 Gene

Latest Assembly
chr16:33,203,841-34,016,012
(GRCh38/hg38)
Size:
812,172 bases
Orientation:
Minus strand

Previous Assembly
chr16:33,215,161-33,232,409
(GRCh37/hg19 by Entrez Gene)
Size:
17,249 bases
Orientation:
Minus strand

Genomic View for LOC105369266 Gene

Genes around LOC105369266 on UCSC Golden Path with GeneCards custom track
LOC105369266 in the GeneCaRNA (GeneCards ncRNA compendium) hub on the UCSC Golden Path

Cytogenetic band:
LOC105369266 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC105369266 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC105369266 Gene

Proteins for LOC105369266 Gene

Post-translational modifications for LOC105369266 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC105369266 Gene

Domains & Families for LOC105369266 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for LOC105369266 Gene

Function for LOC105369266 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC105369266 Gene

Localization for LOC105369266 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC105369266 Gene

Pathways & Interactions for LOC105369266 Gene

PathCards logo

SuperPathways for LOC105369266 Gene

No Data Available

Gene Ontology (GO) - Biological Process for LOC105369266 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for LOC105369266 Gene

Drugs & Compounds for LOC105369266 Gene

No Compound Related Data Available

Transcripts for LOC105369266 Gene

Non-coding RNA (ncRNA) Transcripts from RNAcentral for LOC105369266 Gene

RNAcentral Transcript ID RNA Type Length (nts) # of Sources Source Identifiers and Annotations
URS0000D77FAA_9606 lncRNA 2078 1

RefSeq: NR_158162,

URS0001BEE5BC_9606 lncRNA 540 1

LncBook: HSALNT0230038, HSALNT0230106,

LOC105369266 in the GeneCaRNA (GeneCards ncRNA compendium) hub on the UCSC Golden Path

Alternative Splicing Database (ASD) splice patterns (SP) for LOC105369266 Gene

No ASD Table

Relevant External Links for LOC105369266 Gene

GeneLoc Exon Structure for
LOC105369266

No data available for mRNA/cDNA for LOC105369266 Gene

Expression for LOC105369266 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC105369266 Gene

Orthologs for LOC105369266 Gene

No data available for Orthologs and Evolution for LOC105369266 Gene

Paralogs for LOC105369266 Gene

No data available for Paralogs for LOC105369266 Gene

Variants for LOC105369266 Gene

dbSNP identifiers (rs#s) for variants without ClinVar clinical significance for LOC105369266 Gene

All consequence types are included: molecular consequences (e.g. missense, synonymous), and location-based (e.g. intron, upstream).

SNP Genotyping and Copy Number Assays for research

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC105369266 Gene

Disorders for LOC105369266 Gene

No disorders were found for LOC105369266 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC105369266 Gene

Publications for LOC105369266 Gene

No publications were found for LOC105369266 Gene.

No data available for Mastermind for LOC105369266 Gene

Products for LOC105369266 Gene

Sources for LOC105369266 Gene