Aliases for LOC105369187 Gene

Subcategory (RNA class) for LOC105369187 Gene

lncRNA

Aliases for LOC105369187 Gene

  • Uncharacterized LOC105369187 3

External Ids for LOC105369187 Gene

Previous GeneCards Identifiers for LOC105369187 Gene

  • GC12U902349
  • GC12M065467
  • GC12M065468

Summaries for LOC105369187 Gene

GeneCards Summary for LOC105369187 Gene

LOC105369187 (Uncharacterized LOC105369187) is an RNA Gene, and is affiliated with the lncRNA class.

Additional gene information for LOC105369187 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for LOC105369187 Gene

Genomics for LOC105369187 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for LOC105369187 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH12J065555 Enhancer 1 ENCODE dbSUPER 600.7 +0.3 293 2.1 GATAD2A CTCF TEAD4 PRDM10 RFX1 ZHX2 DDX20 ZNF143 REST RAD21 ENSG00000255866 LOC105369187 LOC105369808 piR-44198-005 LEMD3 LINC02454 LOC100507065 MSRB3 HMGA2
GH12J065556 Promoter/Enhancer 0.7 Ensembl dbSUPER 600.7 +1.9 1910 0.8 FOXA1 ZNF416 ENSG00000255866 LOC105369187 LOC105369808 piR-44198-005 LEMD3 LINC02454 LOC105369809 LOC100507065 MSRB3 HMGA2
GH12J065561 Enhancer 1.2 Ensembl ENCODE dbSUPER 0.4 -7.4 -7390 9 ZNF512 JUND FOXA1 PHF21A ZIC2 ZNF24 ZNF740 HDAC1 SOX6 ZNF766 LEMD3 LLPH LLPH-DT LINC02454 ENSG00000255866 LOC105369187 lnc-WIF1-5 LOC100507065 HMGA2 MSRB3
GH12J065545 Enhancer 0.2 dbSUPER 0.4 +10.8 10827 1.7 LINC02454 piR-44198-005 LOC105369187 LOC105369809 LOC100507065 HMGA2 MSRB3
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LOC105369187 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for LOC105369187 Gene

Genomic Locations for LOC105369187 Gene
chr12:65,544,238-65,557,311
(GRCh38/hg38)
Size:
13,074 bases
Orientation:
Minus strand

Genomic View for LOC105369187 Gene

Genes around LOC105369187 on UCSC Golden Path with GeneCards custom track
LOC105369187 in the GeneCards ncRNA compendium hub on the UCSC Golden Path

Cytogenetic band:
LOC105369187 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC105369187 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC105369187 Gene

Proteins for LOC105369187 Gene

Post-translational modifications for LOC105369187 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC105369187 Gene

Domains & Families for LOC105369187 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for LOC105369187 Gene

Function for LOC105369187 Gene

Phenotypes From GWAS Catalog for LOC105369187 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC105369187 Gene

Localization for LOC105369187 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC105369187 Gene

Pathways & Interactions for LOC105369187 Gene

PathCards logo

SuperPathways for LOC105369187 Gene

No Data Available

Gene Ontology (GO) - Biological Process for LOC105369187 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for LOC105369187 Gene

Drugs & Compounds for LOC105369187 Gene

No Compound Related Data Available

Transcripts for LOC105369187 Gene

Non-coding RNA (ncRNA) Transcripts from RNAcentral for LOC105369187 Gene

RNAcentral Transcript ID Subcategory Length (nts) # of Sources Source Identifiers and Annotations
URS0000A76F5D_9606 lncRNA 725 1

RefSeq: NR_135033,

LOC105369187 in the GeneCards ncRNA compendium hub on the UCSC Golden Path

Additional transcripts not in RNAcentral for LOC105369187 Gene

1 NCBI additional mRNA sequence :

Alternative Splicing Database (ASD) splice patterns (SP) for LOC105369187 Gene

No ASD Table

Relevant External Links for LOC105369187 Gene

GeneLoc Exon Structure for
LOC105369187

Expression for LOC105369187 Gene

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC105369187 Gene

Orthologs for LOC105369187 Gene

No data available for Orthologs and Evolution for LOC105369187 Gene

Paralogs for LOC105369187 Gene

No data available for Paralogs for LOC105369187 Gene

Variants for LOC105369187 Gene

Additional dbSNP identifiers (rs#s) for LOC105369187 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC105369187 Gene

Disorders for LOC105369187 Gene

No disorders were found for LOC105369187 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC105369187 Gene

Publications for LOC105369187 Gene

No publications were found for LOC105369187 Gene.

No data available for Mastermind for LOC105369187 Gene

Products for LOC105369187 Gene

Sources for LOC105369187 Gene