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Aliases for LOC105369147 Gene

Subcategory (RNA class) for LOC105369147 Gene

ncRNA

Quality Score for this RNA gene is

13

Aliases for LOC105369147 Gene

  • Uncharacterized LOC105369147 3

External Ids for LOC105369147 Gene

Previous GeneCards Identifiers for LOC105369147 Gene

  • GC08U902327

Summaries for LOC105369147 Gene

GeneCards Summary for LOC105369147 Gene

LOC105369147 (Uncharacterized LOC105369147) is an RNA Gene, and is affiliated with the ncRNA class.

Additional gene information for LOC105369147 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for LOC105369147 Gene

Genomics for LOC105369147 Gene

GeneHancer (GH) Regulatory Elements for LOC105369147 Gene

Promoters and enhancers for LOC105369147 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH08J103297 Promoter/Enhancer 1.9 EPDnew Ensembl ENCODE 600.7 -0.7 -668 5 ZNF652 ZNF121 SP7 POLR2A PRDM1 MZF1 ZNF680 CREB1 NFRKB ZBTB8A FZD6 BAALC-AS1 LOC105369147 CTHRC1 RNU6-1011P LINC01181 ENSG00000253851 ENSG00000266289 DCAF13 GC08P103328
GH08J103280 Enhancer 1 Ensembl ENCODE 0.4 +16.8 16832 1.6 ZNF652 ELF3 SP5 KAT8 CEBPA GATAD2A RXRB RCOR2 GABPA SOX13 FZD6 RNU6-1011P BAALC-AS1 LOC105369147 PIR51808
GH08J103293 Enhancer 0.5 Ensembl 0.7 +4.5 4495 0.9 SP7 POLR2A WT1 JUND PRDM6 BAALC-AS1 FZD6 LOC105369147 PIR51808
GH08J103254 Enhancer 1.2 Ensembl ENCODE dbSUPER 0.3 +42.7 42732 2.6 SP7 ZNF488 ZNF600 PRDM10 ZIC2 ZEB2 ZNF639 ATF7 ZNF629 ZNF692 PIR51808 FZD6 ENSG00000253851 LINC01181 BAALC BAALC-AS1 LOC105369147
GH08J103279 Enhancer 0.7 Ensembl dbSUPER 0.4 +18.9 18946 1 MLLT1 CTCF RAD21 SMARCA5 ZBTB17 SMC3 FZD6 CTHRC1 BAALC-AS1 LOC105369147 PIR51808
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LOC105369147 on UCSC Golden Path with GeneCards custom track

Genomic Locations for LOC105369147 Gene

Genomic Locations for LOC105369147 Gene
chr8:103,224,446-103,298,433
(GRCh38/hg38)
Size:
73,988 bases
Orientation:
Minus strand

Genomic View for LOC105369147 Gene

Genes around LOC105369147 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC105369147 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC105369147 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC105369147 Gene

Proteins for LOC105369147 Gene

Post-translational modifications for LOC105369147 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC105369147 Gene

Domains & Families for LOC105369147 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for LOC105369147 Gene

Function for LOC105369147 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC105369147 Gene

Localization for LOC105369147 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC105369147 Gene

Pathways & Interactions for LOC105369147 Gene

PathCards logo

SuperPathways for LOC105369147 Gene

No Data Available

Interacting Proteins for LOC105369147 Gene

Gene Ontology (GO) - Biological Process for LOC105369147 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for LOC105369147 Gene

Drugs & Compounds for LOC105369147 Gene

No Compound Related Data Available

Transcripts for LOC105369147 Gene

mRNA/cDNA for LOC105369147 Gene

(1) Additional mRNA sequences :
(4) RNA Central transcripts :

Alternative Splicing Database (ASD) splice patterns (SP) for LOC105369147 Gene

No ASD Table

Relevant External Links for LOC105369147 Gene

GeneLoc Exon Structure for
LOC105369147

Expression for LOC105369147 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC105369147 Gene

Orthologs for LOC105369147 Gene

No data available for Orthologs and Evolution for LOC105369147 Gene

Paralogs for LOC105369147 Gene

No data available for Paralogs for LOC105369147 Gene

Variants for LOC105369147 Gene

Sequence variations from dbSNP and Humsavar for LOC105369147 Gene

SNP ID Clin Chr 08 pos Variation AA Info Type
rs1000012645 -- 103,289,759(-) T/G intron_variant
rs1000054604 -- 103,263,712(-) T/C genic_downstream_transcript_variant, intron_variant
rs1000073096 -- 103,260,174(-) G/A genic_downstream_transcript_variant, intron_variant
rs1000106304 -- 103,264,120(-) T/C/G genic_downstream_transcript_variant, intron_variant
rs1000107518 -- 103,262,953(-) A/C genic_downstream_transcript_variant, intron_variant

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC105369147 Gene

Disorders for LOC105369147 Gene

No disorders were found for LOC105369147 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC105369147 Gene

Publications for LOC105369147 Gene

  1. Complete sequencing and characterization of 21,243 full-length human cDNAs. (PMID: 14702039) Ota T … Sugano S (Nature genetics 2004) 3 58

No data available for External Links for LOC105369147 Gene

Products for LOC105369147 Gene

Sources for LOC105369147 Gene

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