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Aliases for LOC105369143 Gene

Subcategory (RNA class) for LOC105369143 Gene

ncRNA

Quality Score for this RNA gene is

13

Aliases for LOC105369143 Gene

  • Uncharacterized LOC105369143 3

External Ids for LOC105369143 Gene

Previous GeneCards Identifiers for LOC105369143 Gene

  • GC02U903219

Summaries for LOC105369143 Gene

GeneCards Summary for LOC105369143 Gene

LOC105369143 (Uncharacterized LOC105369143) is an RNA Gene, and is affiliated with the ncRNA class.

Additional gene information for LOC105369143 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for LOC105369143 Gene

Genomics for LOC105369143 Gene

GeneHancer (GH) Regulatory Elements for LOC105369143 Gene

Promoters and enhancers for LOC105369143 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH02J176683 Enhancer 0.9 Ensembl ENCODE 600.7 +0.3 259 6.5 ZSCAN21 MAFK PRDM10 ZSCAN4 ZNF316 CEBPB ZBTB44 ZSCAN5C MAFG TRIM24 LOC105369143 HOXD3 HOXD4 LINC01116 RNU6ATAC14P LINC01117
GH02J176684 Enhancer 0.5 Ensembl 0.7 -4.0 -3996 1.8 POLR2A ATF7 ZNF629 TCF7L2 ATF2 ZNF664 ZBTB21 LINC01116 ENSG00000272551 LOC105369143 LINC01117 LOC101929963
GH02J176667 Enhancer 0.7 Ensembl 0.4 +8.4 8405 9.4 IKZF1 IKZF2 ZIC2 ZSCAN4 POLR2A TCF7L2 EED RUNX3 BCLAF1 ELF1 HAGLR HOXD1 LINC01116 RNU6ATAC14P LOC105369143 LINC01117
GH02J176729 Enhancer 0.7 ENCODE 0.3 -49.6 -49643 0.2 SP1 MZF1 RXRA FOXA2 OSR2 JUND GABPA NR2F2 OVOL3 GATA3 LOC101929963 LOC105369143 ENSG00000230552 LINC01117
GH02J176744 Enhancer 0.8 Ensembl ENCODE 0.2 -64.4 -64395 6.2 PKNOX1 ARNT NFE2 FOXA2 ZNF18 FOXA1 PRDM6 NANOG LOC101929963 LOC105369143 ENSG00000230552 LINC01117
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LOC105369143 on UCSC Golden Path with GeneCards custom track

Genomic Locations for LOC105369143 Gene

Genomic Locations for LOC105369143 Gene
chr2:176,673,224-176,680,305
(GRCh38/hg38)
Size:
7,082 bases
Orientation:
Minus strand

Genomic View for LOC105369143 Gene

Genes around LOC105369143 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC105369143 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC105369143 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC105369143 Gene

Proteins for LOC105369143 Gene

Post-translational modifications for LOC105369143 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC105369143 Gene

Domains & Families for LOC105369143 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for LOC105369143 Gene

Function for LOC105369143 Gene

Phenotypes From GWAS Catalog for LOC105369143 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC105369143 Gene

Localization for LOC105369143 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC105369143 Gene

Pathways & Interactions for LOC105369143 Gene

PathCards logo

SuperPathways for LOC105369143 Gene

No Data Available

Interacting Proteins for LOC105369143 Gene

Gene Ontology (GO) - Biological Process for LOC105369143 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for LOC105369143 Gene

Drugs & Compounds for LOC105369143 Gene

No Compound Related Data Available

Transcripts for LOC105369143 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for LOC105369143 Gene

No ASD Table

Relevant External Links for LOC105369143 Gene

GeneLoc Exon Structure for
LOC105369143

No data available for mRNA/cDNA for LOC105369143 Gene

Expression for LOC105369143 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC105369143 Gene

Orthologs for LOC105369143 Gene

No data available for Orthologs and Evolution for LOC105369143 Gene

Paralogs for LOC105369143 Gene

No data available for Paralogs for LOC105369143 Gene

Variants for LOC105369143 Gene

Sequence variations from dbSNP and Humsavar for LOC105369143 Gene

SNP ID Clin Chr 02 pos Variation AA Info Type
rs1000552179 -- 176,680,062(-) C/T non_coding_transcript_variant
rs1000898233 -- 176,673,561(-) A/G non_coding_transcript_variant
rs1001085628 -- 176,678,770(-) C/T intron_variant
rs1001561196 -- 176,678,457(-) T/G intron_variant
rs1001763610 -- 176,673,088(-) C/T downstream_transcript_variant

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC105369143 Gene

Disorders for LOC105369143 Gene

No disorders were found for LOC105369143 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC105369143 Gene

Publications for LOC105369143 Gene

No publications were found for LOC105369143 Gene.

No data available for External Links for LOC105369143 Gene

Products for LOC105369143 Gene

Sources for LOC105369143 Gene

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