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Aliases for LOC105369140 Gene

Aliases for LOC105369140 Gene

  • NBPF Member 6 Pseudogene 3
  • Neuroblastoma Breakpoint Family Member 6-Like Protein 3
  • Neuroblastoma Breakpoint Family Member 6 Pseudogene 3

External Ids for LOC105369140 Gene

Previous GeneCards Identifiers for LOC105369140 Gene

  • GC01U904459

Summaries for LOC105369140 Gene

GeneCards Summary for LOC105369140 Gene

LOC105369140 (NBPF Member 6 Pseudogene) is a Pseudogene.

Additional gene information for LOC105369140 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for LOC105369140 Gene

Genomics for LOC105369140 Gene

GeneHancer (GH) Regulatory Elements for LOC105369140 Gene

Promoters and enhancers for LOC105369140 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH01J143735 Promoter/Enhancer 1.3 Ensembl ENCODE 0.4 -8.4 -8380 1.8 ZSCAN21 SP7 ELF1 GLIS2 PKNOX1 ZBTB8A ZNF600 PRDM10 ZEB2 ZNF639 TRN-GTT6-1 ENSG00000232721 GC01M143736 PFN1P6 LOC105369140
GH01J143778 Enhancer 0.8 Ensembl ENCODE 0.3 +32.2 32221 3.4 CTCF RAD21 REST RFX1 SMC3 ELK1 ZNF654 PRDM10 GC01P143771 ENSG00000270962 LOC105369140
GH01J143756 Enhancer 0.4 Ensembl 0.4 +11.4 11421 2.6 FOS HNF4A SMARCE1 FAM91A3P ENSG00000223779 LOC105369140
GH01J143766 Promoter 0.5 Ensembl 0.3 +21.7 21721 0.4 FAM91A3P GC01P143771 LOC105369140
GH01J143784 Promoter 0.5 Ensembl 0.3 +39.6 39621 0.2 ENSG00000270962 GC01M143789 LOC105369140
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LOC105369140 on UCSC Golden Path with GeneCards custom track

Genomic Locations for LOC105369140 Gene

Genomic Locations for LOC105369140 Gene
chr1:143,744,880-143,785,882
(GRCh38/hg38)
Size:
41,003 bases
Orientation:
Plus strand

Genomic View for LOC105369140 Gene

Genes around LOC105369140 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC105369140 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC105369140 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC105369140 Gene

Proteins for LOC105369140 Gene

Post-translational modifications for LOC105369140 Gene

No Post-translational modifications

Other Protein References for LOC105369140 Gene

No data available for DME Specific Peptides for LOC105369140 Gene

Domains & Families for LOC105369140 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for LOC105369140 Gene

Function for LOC105369140 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC105369140 Gene

Localization for LOC105369140 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC105369140 Gene

Pathways & Interactions for LOC105369140 Gene

PathCards logo

SuperPathways for LOC105369140 Gene

No Data Available

Interacting Proteins for LOC105369140 Gene

Gene Ontology (GO) - Biological Process for LOC105369140 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for LOC105369140 Gene

Drugs & Compounds for LOC105369140 Gene

No Compound Related Data Available

Transcripts for LOC105369140 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for LOC105369140 Gene

No ASD Table

Relevant External Links for LOC105369140 Gene

GeneLoc Exon Structure for
LOC105369140

No data available for mRNA/cDNA for LOC105369140 Gene

Expression for LOC105369140 Gene

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC105369140 Gene

Orthologs for LOC105369140 Gene

No data available for Orthologs and Evolution for LOC105369140 Gene

Paralogs for LOC105369140 Gene

No data available for Paralogs for LOC105369140 Gene

Variants for LOC105369140 Gene

Sequence variations from dbSNP and Humsavar for LOC105369140 Gene

SNP ID Clin Chr 01 pos Variation AA Info Type
rs1055864 -- 143,746,387(+) G/A intron_variant
rs1055865 -- 143,746,418(+) T/C intron_variant
rs1055866 -- 143,746,423(+) T/A/C intron_variant
rs1055868 -- 143,746,501(+) T/G intron_variant
rs1055869 -- 143,746,505(+) T/G intron_variant

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC105369140 Gene

Disorders for LOC105369140 Gene

No disorders were found for LOC105369140 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC105369140 Gene

Publications for LOC105369140 Gene

No publications were found for LOC105369140 Gene.

No data available for External Links for LOC105369140 Gene

Products for LOC105369140 Gene

Sources for LOC105369140 Gene

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