Aliases for LOC105274304 Gene

Subcategory (RNA class) for LOC105274304 Gene

lncRNA

Number of RNA Genes sources:

0 / 14

Aliases for LOC105274304 Gene

  • Uncharacterized LOC105274304 3

External Ids for LOC105274304 Gene

Previous GeneCards Identifiers for LOC105274304 Gene

  • GC17U902329
  • GC17P076673

Summaries for LOC105274304 Gene

GeneCards Summary for LOC105274304 Gene

LOC105274304 (Uncharacterized LOC105274304) is an RNA Gene, and is affiliated with the lncRNA class.

Additional gene information for LOC105274304 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for LOC105274304 Gene

Genomics for LOC105274304 Gene

GeneHancer (GH) Regulatory Elements for LOC105274304 Gene

Promoters and enhancers for LOC105274304 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH17J076669 Promoter/Enhancer 2.1 Ensembl ENCODE CraniofacialAtlas dbSUPER 500.7 +0.3 321 4.6 FOXK2 ZBTB40 TCF12 POLR2G SP1 RBAK GTF2E2 PHF8 FOS PHB2 ENSG00000261335 LOC105274304 UNK METTL23 ENSG00000267342 MXRA7 SRP68 SRSF2 MFSD11 CDK3
GH17J076667 Enhancer 1.2 FANTOM5 Ensembl dbSUPER 0.7 -3.8 -3827 1.8 FOS ZBTB10 ZNF263 TRIM28 ZEB1 OSR2 BCL11A MYNN WT1 ZBTB17 MXRA7 UBE2O LOC105274304 RF00026-457 RNU6-227P SNHG16
GH17J076659 Promoter/Enhancer 1.5 Ensembl ENCODE dbSUPER 0.4 -12.0 -11966 1.8 ZSCAN5C TCF12 ZNF639 ZNF10 ZIC2 HES1 CUX1 KLF7 MYC CTBP1 MXRA7 RF00026-457 RNU6-227P LOC105274304 SNHG16
GH17J076657 Enhancer 0.8 ENCODE dbSUPER 0.4 -13.6 -13601 1 TCF7 KAT7 HDAC2 BCL6 HHEX RARA NR2F6 MIXL1 KDM1A SP1 RF00026-457 RNU6-227P LOC105274304 SNHG16
GH17J076656 Enhancer 0.5 dbSUPER 0.4 -14.8 -14790 0.3 KAT7 SPI1 ZNF335 ZMYM3 MXD3 ZNF316 ZNF121 ZNF766 RF00026-457 RNU6-227P LOC105274304 SNHG16
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LOC105274304 on UCSC Golden Path with GeneCards custom track

Genomic Locations for LOC105274304 Gene

Genomic Locations for LOC105274304 Gene
chr17:76,671,928-76,673,658
(GRCh38/hg38)
Size:
1,731 bases
Orientation:
Plus strand

Genomic View for LOC105274304 Gene

Genes around LOC105274304 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC105274304 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC105274304 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC105274304 Gene

Proteins for LOC105274304 Gene

Post-translational modifications for LOC105274304 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC105274304 Gene

Domains & Families for LOC105274304 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for LOC105274304 Gene

Function for LOC105274304 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC105274304 Gene

Localization for LOC105274304 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC105274304 Gene

Pathways & Interactions for LOC105274304 Gene

PathCards logo

SuperPathways for LOC105274304 Gene

No Data Available
;

Gene Ontology (GO) - Biological Process for LOC105274304 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for LOC105274304 Gene

Drugs & Compounds for LOC105274304 Gene

No Compound Related Data Available

Transcripts for LOC105274304 Gene

mRNA/cDNA for LOC105274304 Gene

1 RNACentral transcripts :
1 REFSEQ mRNAs :
2 NCBI additional mRNA sequence :

Alternative Splicing Database (ASD) splice patterns (SP) for LOC105274304 Gene

No ASD Table

Relevant External Links for LOC105274304 Gene

GeneLoc Exon Structure for
LOC105274304

Expression for LOC105274304 Gene

Transcriptomic regulation report from SPP (The Signaling Pathways Project) for LOC105274304

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC105274304 Gene

Orthologs for LOC105274304 Gene

No data available for Orthologs and Evolution for LOC105274304 Gene

Paralogs for LOC105274304 Gene

No data available for Paralogs for LOC105274304 Gene

Variants for LOC105274304 Gene

Additional dbSNP identifiers (rs#s) for LOC105274304 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC105274304 Gene

Disorders for LOC105274304 Gene

No disorders were found for LOC105274304 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC105274304 Gene

Publications for LOC105274304 Gene

  1. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg RL … Mammalian Gene Collection Program Team (Proceedings of the National Academy of Sciences of the United States of America 2002) 3 54

No data available for Mastermind for LOC105274304 Gene

Products for LOC105274304 Gene

Sources for LOC105274304 Gene