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Aliases for LOC105274304 Gene

Subcategory (RNA class) for LOC105274304 Gene

lncRNA

Quality Score for this RNA gene is

2

Aliases for LOC105274304 Gene

  • Uncharacterized LOC105274304 3
  • AC005837.1 5

External Ids for LOC105274304 Gene

ORGUL Members for LOC105274304 Gene

Previous GeneCards Identifiers for LOC105274304 Gene

  • GC17U902329

Summaries for LOC105274304 Gene

GeneCards Summary for LOC105274304 Gene

LOC105274304 (Uncharacterized LOC105274304) is an RNA Gene, and is affiliated with the lncRNA class.

Additional gene information for LOC105274304 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for LOC105274304 Gene

Genomics for LOC105274304 Gene

GeneHancer (GH) Regulatory Elements for LOC105274304 Gene

Promoters and enhancers for LOC105274304 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH17I076669 Promoter/Enhancer 1.8 Ensembl ENCODE dbSUPER 550.8 +0.3 321 4.6 CLOCK MLX ZFP64 FEZF1 DMAP1 IRF4 YY1 SLC30A9 ZNF213 ZNF143 GC17M076671 LOC105274304 UNK SRSF2 METTL23 ENSG00000267342 ENSG00000266980 MXRA7 MFSD11 SRP68
GH17I076668 Enhancer 0.7 FANTOM5 dbSUPER 0.8 -4.0 -3987 0 MAZ ZNF629 ZNF384 GLI4 TRIM28 GC17P076663 LOC105274304
GH17I076667 Enhancer 0.5 dbSUPER 0.8 -4.4 -4443 0.4 HDGF SCRT2 ZEB2 ZNF2 ZNF18 ZBTB20 ZBTB17 GC17P076663 LOC105274304
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around LOC105274304 on UCSC Golden Path with GeneCards custom track

Genomic Locations for LOC105274304 Gene

Genomic Locations for LOC105274304 Gene
chr17:76,671,928-76,673,658
(GRCh38/hg38)
Size:
1,731 bases
Orientation:
Plus strand
chr17:74,668,024-74,669,740
(GRCh37/hg19)

Genomic View for LOC105274304 Gene

Genes around LOC105274304 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC105274304 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC105274304 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC105274304 Gene

Proteins for LOC105274304 Gene

Post-translational modifications for LOC105274304 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC105274304 Gene

Domains & Families for LOC105274304 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for LOC105274304 Gene

Function for LOC105274304 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC105274304 Gene

Localization for LOC105274304 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC105274304 Gene

Pathways & Interactions for LOC105274304 Gene

SuperPathways for LOC105274304 Gene

No Data Available

Interacting Proteins for LOC105274304 Gene

Gene Ontology (GO) - Biological Process for LOC105274304 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for LOC105274304 Gene

Drugs & Compounds for LOC105274304 Gene

No Compound Related Data Available

Transcripts for LOC105274304 Gene

mRNA/cDNA for LOC105274304 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for LOC105274304 Gene

No ASD Table

Relevant External Links for LOC105274304 Gene

GeneLoc Exon Structure for
LOC105274304

Expression for LOC105274304 Gene

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC105274304 Gene

Orthologs for LOC105274304 Gene

Evolution for LOC105274304 Gene

ENSEMBL:
Gene Tree for LOC105274304 (if available)
TreeFam:
Gene Tree for LOC105274304 (if available)

No data available for Orthologs for LOC105274304 Gene

Paralogs for LOC105274304 Gene

No data available for Paralogs for LOC105274304 Gene

Variants for LOC105274304 Gene

Sequence variations from dbSNP and Humsavar for LOC105274304 Gene

SNP ID Clin Chr 17 pos Variation AA Info Type
rs1001510883 -- 76,671,488(+) C/T upstream_transcript_variant
rs1001605758 -- 76,671,027(+) G/A upstream_transcript_variant
rs1001665113 -- 76,670,716(+) T/A upstream_transcript_variant
rs1003457761 -- 76,671,624(+) A/T upstream_transcript_variant
rs1003900762 -- 76,673,428(+) G/C non_coding_transcript_variant

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC105274304 Gene

Disorders for LOC105274304 Gene

Additional Disease Information for LOC105274304

No disorders were found for LOC105274304 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for LOC105274304 Gene

Publications for LOC105274304 Gene

  1. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg RL … Mammalian Gene Collection Program Team (Proceedings of the National Academy of Sciences of the United States of America 2002) 3 58

Products for LOC105274304 Gene

Sources for LOC105274304 Gene

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