Aliases for LOC104968399 Gene

Subcategory (RNA class) for LOC104968399 Gene

lncRNA

Number of RNA Genes sources:

3 / 17

Aliases for LOC104968399 Gene

  • Uncharacterized LOC104968399 3
  • NONHSAG023224.2 91
  • HSALNG0119691 164
  • Lnc-MYOM1-1 165

External Ids for LOC104968399 Gene

Previous GeneCards Identifiers for LOC104968399 Gene

  • GC18U900886

Summaries for LOC104968399 Gene

GeneCards Summary for LOC104968399 Gene

LOC104968399 (Uncharacterized LOC104968399) is an RNA Gene, and is affiliated with the lncRNA class.

Additional gene information for LOC104968399 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for LOC104968399 Gene

Genomics for LOC104968399 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for LOC104968399 Gene
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LOC104968399 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for LOC104968399 Gene

Genomic Locations for LOC104968399 Gene
chr18:3,255,436-3,262,359
(GRCh38/hg38)
Size:
6,924 bases
Orientation:
Minus strand

Genomic View for LOC104968399 Gene

Genes around LOC104968399 on UCSC Golden Path with GeneCards custom track
LOC104968399 in the GeneCards ncRNA compendium hub on the UCSC Golden Path

Cytogenetic band:
LOC104968399 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC104968399 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC104968399 Gene

Proteins for LOC104968399 Gene

Post-translational modifications for LOC104968399 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC104968399 Gene

Domains & Families for LOC104968399 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for LOC104968399 Gene

Function for LOC104968399 Gene

Phenotypes From GWAS Catalog for LOC104968399 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC104968399 Gene

Localization for LOC104968399 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC104968399 Gene

Pathways & Interactions for LOC104968399 Gene

PathCards logo

SuperPathways for LOC104968399 Gene

No Data Available

Gene Ontology (GO) - Biological Process for LOC104968399 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for LOC104968399 Gene

Drugs & Compounds for LOC104968399 Gene

No Compound Related Data Available

Transcripts for LOC104968399 Gene

Non-coding RNA (ncRNA) Transcripts from RNAcentral for LOC104968399 Gene

RNAcentral Transcript ID Subcategory Length (nts) # of Sources Source Identifiers and Annotations
URS00007E440A_9606 lncRNA 850 4

RefSeq: NR_130145,

LncBook: HSALNT0247090,

LNCipedia: lnc-MYOM1-1:6,

NONCODE: NONHSAT178158.1,

URS0000D5764B_9606 lncRNA 1031 2

RefSeq: NR_130143,

LNCipedia: lnc-MYOM1-1:4,

URS0000D78112_9606 lncRNA 693 1

RefSeq: NR_130144,

URS0000493098_9606 lncRNA 1035 3

LncBook: HSALNT0247089,

LNCipedia: lnc-MYOM1-1:2,

NONCODE: NONHSAT056976.2,

URS00005CCB6D_9606 lncRNA 723 3

LncBook: HSALNT0247091,

LNCipedia: lnc-MYOM1-1:1,

NONCODE: NONHSAT056977.2,

LOC104968399 in the GeneCards ncRNA compendium hub on the UCSC Golden Path

Additional transcripts not in RNAcentral for LOC104968399 Gene

10 NCBI additional mRNA sequence :

Alternative Splicing Database (ASD) splice patterns (SP) for LOC104968399 Gene

No ASD Table

Relevant External Links for LOC104968399 Gene

GeneLoc Exon Structure for
LOC104968399

Expression for LOC104968399 Gene

Transcriptomic regulation report from SPP (The Signaling Pathways Project) for LOC104968399

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC104968399 Gene

Orthologs for LOC104968399 Gene

No data available for Orthologs and Evolution for LOC104968399 Gene

Paralogs for LOC104968399 Gene

No data available for Paralogs for LOC104968399 Gene

Variants for LOC104968399 Gene

Additional dbSNP identifiers (rs#s) for LOC104968399 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC104968399 Gene

Disorders for LOC104968399 Gene

No disorders were found for LOC104968399 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC104968399 Gene

Publications for LOC104968399 Gene

  1. Diversification of transcriptional modulation: large-scale identification and characterization of putative alternative promoters of human genes. (PMID: 16344560) Kimura K … Sugano S (Genome research 2006) 3
  2. Creation of genome-wide protein expression libraries using random activation of gene expression. (PMID: 11329013) Harrington JJ … Ducar M (Nature biotechnology 2001) 3

No data available for Mastermind for LOC104968399 Gene

Products for LOC104968399 Gene

Sources for LOC104968399 Gene