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Aliases for LOC103689916 Gene
Summaries for LOC103689916 Gene
GeneCards Summary for LOC103689916 Gene
LOC103689916 (Coiled-Coil-Helix-Coiled-Coil-Helix Domain Containing 10 Pseudogene) is a Pseudogene.
Additional gene information for LOC103689916 Gene
No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for LOC103689916 Gene
Genomics for LOC103689916 Gene
GeneHancer (GH) Regulatory Elements Pubs
Promoters and enhancers for LOC103689916 Gene
| GeneHancer (GH) Identifier | GH Type | GH Score |
GH Sources | Gene Association Score | Total Score | TSS distance (kb) | Number of Genes Away | Size (kb) | Transcription Factor Binding Sites |
Gene Targets |
|---|---|---|---|---|---|---|---|---|---|---|
| GH19J010219 | Enhancer | 1 | Ensembl ENCODE | 0.7 | -3.7 | -3689 | 5.1 | SP1 CREB1 GATAD2A CTCF ATF7 TEAD4 ZNF143 RELA PATZ1 RAD21 | MRPL4 S1PR2 SLC44A2 SHFL P2RY11 LOC103689916 lnc-ZGLP1-6 DNMT1 EIF3G | |
| GH19J010206 | Enhancer | 0.8 | ENCODE | 0.4 | +10.7 | 10682 | 1 | HNRNPL GATAD2A TFE3 NFKBIZ RXRB IRF2 YY1 CBX3 JUND ESR1 | MRPL4 ICAM1 RDH8 COL5A3 SHFL piR-38580-136 LOC103689916 DNMT1 EIF3G | |
| GH19J010204 | Enhancer | 0.5 | ENCODE | 0.4 | +12.7 | 12669 | 0.2 | SOX13 ESR1 SAP130 FOSL2 RFX5 ZNF687 FOS SOX5 | FJ601684-215 piR-38580-136 MRPL4 ICAM1 RDH8 COL5A3 LOC103689916 DNMT1 EIF3G | |
| GH19J010214 | Enhancer | 0.3 | ENCODE | 0.7 | +2.4 | 2398 | 0.5 | CEBPB | LOC103689916 piR-38580-136 DNMT1 EIF3G | |
| GH19J010208 | Enhancer | 0.3 | Ensembl | 0.4 | +7.2 | 7248 | 4.2 | MAFK ZNF121 | MRPL4 ICAM1 COL5A3 RDH8 SHFL LOC103689916 piR-38580-136 DNMT1 EIF3G |
- Elite GeneHancer and/or Elite GeneHancer-gene association
Download GeneHancer data from 2017 publication |
Request up-to-date GeneHancer data (full dataset)
GeneHancers around LOC103689916 on the GeneHancer Hub at the UCSC Golden Path
Genomic Locations for LOC103689916 Gene
Genomic Locations for LOC103689916 Gene
- chr19:10,216,989-10,217,349
- (GRCh38/hg38)
- Size:
- 361 bases
- Orientation:
- Minus strand
Genomic View for LOC103689916 Gene
Genes around LOC103689916 on UCSC Golden Path with GeneCards custom track
- Cytogenetic band:
-
- 19p13.2 by Entrez Gene
LOC103689916 Gene in genomic location: bands according to
Ensembl, locations according to GeneLoc
(and/or Entrez Gene and/or Ensembl if different)
Genomic Neighborhood
• Exon Structure
• Gene Density
RefSeq DNA sequence for LOC103689916 Gene
Proteins for LOC103689916 Gene
Post-translational modifications for LOC103689916 Gene
No Post-translational modifications
Antibody Products
Protein Products
- Search Origene for Purified Proteins, MassSpec and Protein Over-expression Lysates for LOC103689916
- Origene Custom Protein Services for LOC103689916
No data available for DME Specific Peptides for LOC103689916 Gene
Domains & Families for LOC103689916 Gene
No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for LOC103689916 Gene
Function for LOC103689916 Gene
Phenotypes From GWAS Catalog for LOC103689916 Gene
Animal Model Products
- Taconic Biosciences: Generate A Custom CRISPR Mouse Model For Your Study
miRNA Products
Inhibitory RNA Products
Clone Products
No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC103689916 Gene
Localization for LOC103689916 Gene
No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC103689916 Gene
Transcripts for LOC103689916 Gene
miRNA Products
Inhibitory RNA Products
Clone Products
Relevant External Links for LOC103689916 Gene
- GeneLoc Exon Structure for
- LOC103689916
No data available for mRNA/cDNA for LOC103689916 Gene
Expression for LOC103689916 Gene
No Expression Related Data Available
Primer Products
No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC103689916 Gene
Orthologs for LOC103689916 Gene
No data available for Orthologs and Evolution for LOC103689916 Gene
Paralogs for LOC103689916 Gene
No data available for Paralogs for LOC103689916 Gene
Variants for LOC103689916 Gene
No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC103689916 Gene
Disorders for LOC103689916 Gene
No disorders were found for LOC103689916 Gene.
No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC103689916 Gene
Publications for LOC103689916 Gene
No publications were found for LOC103689916 Gene.
No data available for Mastermind for LOC103689916 Gene
Products for LOC103689916 Gene
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- Lentiviral ORF Clones
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- Search GeneCopoeia for shRNA, lentivirus, and/or AAV clone products for LOC103689916
Sources for LOC103689916 Gene
- (1) GeneCards
- (2) HGNC
- (3) NCBI Entrez Gene
- (4) UniProtKB/Swiss-Prot
- (5) Ensembl
- (6) OMIM
- (7) GeneLoc
- (8) Gene Wiki
- (9) UCSC
- (10) PhosphoSitePlus
- (11) Cell Signaling Technology
- (12) GO
- (13) UniProtKB/TrEMBL
- (14) InterPro
- (15) ProtoNet
- (16) Blocks
- (17) MGI
- (18) IUBMB
- (19) KEGG
- (20) MINT
- (21) STRING
- (22) IntAct
- (23) Novoseek
- (24) PharmGKB
- (25) DrugBank
- (26) HMDB
- (27) ASD
- (28) SAGE
- (29) SOURCE
- (30) HomoloGene
- (31) PanEnsembl
- (32) euGenes
- (33) SGD
- (34) FlyBase
- (35) WormBase
- (36) Pseudogene
- (37) DGV
- (38) dbSNP
- (39) GenAtlas
- (40) HGMD
- (41) GAD
- (42) BGMUT
- (43) HuGE
- (44) Atlas
- (45) GenBank
- (46) HORDE
- (47) HUGE
- (48) IMGT
- (49) Leiden
- (50) miRBase
- (51) DME
- (52) OriGene
- (53) PubMed
- (54) R&D Systems
- (55) TGDB
- (56) Tocris
- (57) Abcam
- (58) Novus Biologicals
- (59) ProSpec
- (60) Sino Biological
- (61) GenScript
- (62) Qiagen
- (63) OCA
- (64) Proteopedia
- (65) MOPED
- (66) neXtProt
- (67) Reactome
- (68) GeneGo (Thomson Reuters)
- (69) DISEASES
- (70) SIMAP
- (71) GenomeRNAi
- (72) LifeMap
- (73) miRTarBase
- (74) MalaCards
- (75) Invitrogen
- (76) BitterDB
- (77) ESI-BIO
- (78) RefSeq
- (79) BioSystems
- (80) MaxQB
- (81) IUPHAR
- (82) BioGPS
- (83) Illumina
- (84) COMPARTMENTS
- (85) HOMER
- (86) PaxDb
- (87) ApexBio
- (88) Addgene
- (89) antibodies-online
- (90) CYP
- (91) NONCODE
- (92) TreeFam
- (93) PathCards
- (94) GeneReviews
- (95) GeneTex
- (96) Taconic Biosciences
- (97) GTEx
- (98) ProteomicsDB
- (99) SCBT
- (100) DGIdb
- (101) ClinicalTrials
- (102) RVIS
- (103) SIGNOR
- (104) diseasecard
- (105) NIH Rare Diseases
- (106) Orphanet
- (107) UMLS
- (108) GTR
- (109) Disease Ontology
- (110) Genetics Home Reference
- (111) MeSH
- (112) MedlinePlus
- (113) CDC
- (114) NINDS
- (115) NCBI Bookshelf
- (116) ClinVar
- (117) Gene Damage Index
- (118) HPO
- (119) UDN
- (120) VISTA
- (121) FANTOM5
- (122) ENCODE
- (123) ProSci
- (124) Horizon
- (125) The Signaling Pathways Project (SPP)
- (126) IID
- (127) VectorBuilder
- (128) SNPedia
- (129) BRCA Exchange
- (130) CIViC
- (131) ProteoGenix
- (132) dbSUPER
- (133) TISSUES
- (134) Gene ORGANizer
- (135) abm
- (136) Human Protein Atlas
- (137) GWAS Catalog
- (138) Monarch Initiative
- (139) DataMed
- (140) HumanCyc
- (141) UCNEbase
- (142) EPDnew
- (143) Applied Biosystems
- (144) GlyConnect
- (145) Aminode
- (146) GeneCopoeia
- (147) GPS-Prot
- (148) RNACentral
- (149) LncRNADisease
- (150) LOVD
- (151) miR2Disease
- (152) DiseaseEnhancer
- (153) Boster Bio
- (154) Biorbyt
- (155) Biocompare
- (156) Mastermind
- (157) CTD^2 Dashboard
- (158) CraniofacialAtlas
- (159) GeneImprint
- (160) Synthego
- (161) ENA
- (162) GtRNAdb
- (163) LncBase
- (164) LncBook
- (165) LNCipedia
- (166) Modomics
- (167) PDBe
- (168) Rfam
- (169) SILVA
- (170) snOPY
- (171) SRPDB
- (172) GENCODE
- (173) TarBase
- (174) Signalway Antibody
- (175) Open Targets Platform
- (176) 5SRRNADB
- (177) snoDB
- (178) MirGeneDB