Aliases for LOC103021295 Gene

Subcategory (RNA class) for LOC103021295 Gene

lncRNA

Number of RNA Genes sources:

1 / 14

Aliases for LOC103021295 Gene

  • Uncharacterized LOC103021295 3
  • Lnc-ANKFY1-5 168
  • Lnc-RHEX-11 168

External Ids for LOC103021295 Gene

Previous GeneCards Identifiers for LOC103021295 Gene

  • GC00U936078
  • GC01U904423

Summaries for LOC103021295 Gene

GeneCards Summary for LOC103021295 Gene

LOC103021295 (Uncharacterized LOC103021295) is an RNA Gene, and is affiliated with the lncRNA class.

Additional gene information for LOC103021295 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for LOC103021295 Gene

Genomics for LOC103021295 Gene

GeneHancer (GH) Regulatory Elements for LOC103021295 Gene

Promoters and enhancers for LOC103021295 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH01J205950 Enhancer 0.8 Ensembl ENCODE dbSUPER 0.4 -6.5 -6524 3.2 MYC FOS FOSL1 BHLHE40 USF2 CREM SCRT2 PM20D1 SLC26A9 LOC103021295 SLC26A9-AS1
GH01J205943 Promoter/Enhancer 0.8 EPDnew ENCODE 0.4 -14.4 -14417 0.2 GATA3 GATA2 NFYB SPI1 SLC26A9 SLC26A9-AS1 LOC103021295
GH01J205948 Enhancer 0.7 Ensembl 0.4 -10.5 -10525 0.4 ZNF217 CLOCK GATAD2B CTBP1 SIN3A HES1 ESRRA MYC MBD2 FOS RAB29 PM20D1 SLC26A9 LOC103021295 SLC26A9-AS1
GH01J205947 Enhancer 0.4 Ensembl 0.4 -9.6 -9624 1 REST ZNF585B KLF13 SPI1 RAB29 PM20D1 SLC26A9 LOC103021295 SLC26A9-AS1
GH01J205954 Enhancer 0.3 Ensembl 0.7 -4.2 -4224 1 CTCF LOC103021295 SLC26A9 SLC26A9-AS1
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LOC103021295 on UCSC Golden Path with GeneCards custom track

Genomic Locations for LOC103021295 Gene

Genomic Locations for LOC103021295 Gene
chr1:205,957,925-205,958,388
(GRCh38/hg38)
Size:
464 bases
Orientation:
Plus strand

Genomic View for LOC103021295 Gene

Genes around LOC103021295 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC103021295 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC103021295 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC103021295 Gene

Proteins for LOC103021295 Gene

Post-translational modifications for LOC103021295 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC103021295 Gene

Domains & Families for LOC103021295 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for LOC103021295 Gene

Function for LOC103021295 Gene

Phenotypes From GWAS Catalog for LOC103021295 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC103021295 Gene

Localization for LOC103021295 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC103021295 Gene

Pathways & Interactions for LOC103021295 Gene

PathCards logo

SuperPathways for LOC103021295 Gene

No Data Available
;

Gene Ontology (GO) - Biological Process for LOC103021295 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for LOC103021295 Gene

Drugs & Compounds for LOC103021295 Gene

No Compound Related Data Available

Transcripts for LOC103021295 Gene

mRNA/cDNA for LOC103021295 Gene

1 RNACentral transcripts :
1 REFSEQ mRNAs :
2 NCBI additional mRNA sequence :
2 LNCipedia transcripts :

Alternative Splicing Database (ASD) splice patterns (SP) for LOC103021295 Gene

No ASD Table

Relevant External Links for LOC103021295 Gene

GeneLoc Exon Structure for
LOC103021295

Expression for LOC103021295 Gene

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC103021295 Gene

Orthologs for LOC103021295 Gene

No data available for Orthologs and Evolution for LOC103021295 Gene

Paralogs for LOC103021295 Gene

No data available for Paralogs for LOC103021295 Gene

Variants for LOC103021295 Gene

Additional dbSNP identifiers (rs#s) for LOC103021295 Gene

Structural Variations from Database of Genomic Variants (DGV) for LOC103021295 Gene

Variant ID Type Subtype PubMed ID
dgv509n67 CNV loss 20364138
esv2762544 CNV gain 21179565
esv3368111 CNV duplication 20981092
nsv1058176 CNV gain 25217958
nsv1065237 CNV gain 25217958
nsv1066651 CNV gain 25217958
nsv821134 CNV duplication 20802225

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Variation tolerance and Additional Variant Information for LOC103021295 Gene

Disorders for LOC103021295 Gene

No disorders were found for LOC103021295 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC103021295 Gene

Publications for LOC103021295 Gene

No publications were found for LOC103021295 Gene.

No data available for Mastermind for LOC103021295 Gene

Products for LOC103021295 Gene

Sources for LOC103021295 Gene