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Aliases for LOC102725254 Gene
Subcategory (RNA class) for LOC102725254 Gene
lncRNA
Quality Score for this RNA gene is
14
Aliases for LOC102725254 Gene
External Ids for LOC102725254 Gene
- Entrez Gene: 102725254
Previous GeneCards Identifiers for LOC102725254 Gene
- GC19U901834
Summaries for LOC102725254 Gene
GeneCards Summary for LOC102725254 Gene
LOC102725254 (Uncharacterized LOC102725254) is an RNA Gene, and is affiliated with the lncRNA class.
Additional gene information for LOC102725254 Gene
No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for LOC102725254 Gene
Genomics for LOC102725254 Gene
GeneHancer (GH) Regulatory Elements for LOC102725254 Gene
Promoters and enhancers for LOC102725254 Gene
| GeneHancer (GH) Identifier | GH Type | GH Score |
GH Sources | Gene Association Score | Total Score | TSS distance (kb) | Number of Genes Away | Size (kb) | Transcription Factor Binding Sites |
Gene Targets |
|---|---|---|---|---|---|---|---|---|---|---|
| GH19J018202 | Promoter/Enhancer | 2.3 | EPDnew Ensembl ENCODE CraniofacialAtlas dbSUPER | 750.6 | +1.1 | 1124 | 6.5 | SP1 CTCF SMARCE1 USF2 ATF1 FOS CREB1 CC2D1A NFYC ZNF701 | ENSG00000268650 LOC102725254 RAB3A piR-34822-156 lnc-PDE4C-1 UPF1 ENSG00000268030 IQCN ENSG00000268938 COLGALT1 |
- Elite GeneHancer and/or Elite GeneHancer-gene association
Download GeneHancer data from 2017 publication |
Request up-to-date GeneHancer data (full dataset)
GeneHancers around LOC102725254 on UCSC Golden Path with GeneCards custom track
Genomic Locations for LOC102725254 Gene
Genomic Locations for LOC102725254 Gene
- chr19:18,204,730-18,205,569
- (GRCh38/hg38)
- Size:
- 840 bases
- Orientation:
- Plus strand
Genomic View for LOC102725254 Gene
Genes around LOC102725254 on UCSC Golden Path with GeneCards custom track
- Cytogenetic band:
-
- 19p13.11 by Entrez Gene
LOC102725254 Gene in genomic location: bands according to
Ensembl, locations according to GeneLoc
(and/or Entrez Gene and/or Ensembl if different)
Genomic Neighborhood
• Exon Structure
• Gene Density
RefSeq DNA sequence for LOC102725254 Gene
Proteins for LOC102725254 Gene
Post-translational modifications for LOC102725254 Gene
No Post-translational modifications
Antibody Products
Protein Products
- Search Origene for Purified Proteins, MassSpec and Protein Over-expression Lysates for LOC102725254
- Origene Custom Protein Services for LOC102725254
No data available for DME Specific Peptides for LOC102725254 Gene
Domains & Families for LOC102725254 Gene
No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for LOC102725254 Gene
Function for LOC102725254 Gene
Animal Model Products
- Taconic Biosciences: Generate A Custom CRISPR Mouse Model For Your Study
miRNA Products
Inhibitory RNA Products
Clone Products
No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC102725254 Gene
Localization for LOC102725254 Gene
No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC102725254 Gene
Transcripts for LOC102725254 Gene
mRNA/cDNA for LOC102725254 Gene
- (1) REFSEQ mRNAs :
- (2) Additional mRNA sequences :
- (9) RNACentral transcripts :
- (7) LNCipedia transcripts :
- (4) NONCODE transcripts :
- (3) LncBook transcripts :
miRNA Products
Inhibitory RNA Products
Clone Products
Relevant External Links for LOC102725254 Gene
- GeneLoc Exon Structure for
- LOC102725254
Expression for LOC102725254 Gene
Primer Products
Gene Expression Assay Products
No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC102725254 Gene
Orthologs for LOC102725254 Gene
No data available for Orthologs and Evolution for LOC102725254 Gene
Paralogs for LOC102725254 Gene
No data available for Paralogs for LOC102725254 Gene
Variants for LOC102725254 Gene
| SNP ID | Clin | Chr 19 pos | Variation | AA Info | Type |
|---|---|---|---|---|---|
| rs1002367915 | -- | 18,206,041(+) | T/C | downstream_transcript_variant | |
| rs1003258949 | -- | 18,203,739(+) | C/A | upstream_transcript_variant | |
| rs1003591834 | -- | 18,204,515(+) | G/T | upstream_transcript_variant | |
| rs1003642893 | -- | 18,204,841(+) | A/G | non_coding_transcript_variant | |
| rs1005117184 | -- | 18,204,023(+) | A/C/T | upstream_transcript_variant |
SNP Genotyping and Copy Number Assay Products
No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC102725254 Gene
Disorders for LOC102725254 Gene
No disorders were found for LOC102725254 Gene.
No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC102725254 Gene
Publications for LOC102725254 Gene
No publications were found for LOC102725254 Gene.
No data available for External Links for LOC102725254 Gene
Products for LOC102725254 Gene
- Browse OriGene Antibodies
- Custom Antibody Services
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- Custom Assay Services
- Search Origene for Purified Proteins, MassSpec and Protein Over-expression Lysates for LOC102725254
- Origene Custom Protein Services for LOC102725254
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- Browse OriGene qPCR primer pairs and template standards
- Browse CRISPR knockouts for LOC102725254
- Custom cloning services - gene synthesis, subcloning, mutagenesis, variant library, vector shuttling
- Browse OriGene miRNA Products For LOC102725254
- Browse Sino Biological cDNA Clones
- Browse Sino Biological Recombinant Proteins
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- Browse Sino Biological Assays
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- High-throughput Antibody Production Service
- Protein Production Service
- Epitope Tag Antibodies & Reporter Protein Antibodies
- Lentiviral ORF Clones
- Browse GeneCopoeia Cell Lines
- Search GeneCopoeia for knockout CRISPR/Cas9 clones, lentivirus, and/or AAV products for LOC102725254
- Search GeneCopoeia for ORF cDNA, lentivirus, AAV viral particles, and/or promoter clone products for LOC102725254
- Search GeneCopoeia for miRNA 3'UTR Target clone products for LOC102725254
- Search GeneCopoeia for shRNA, lentivirus, and/or AAV clone products for LOC102725254
Sources for LOC102725254 Gene
- (1) GeneCards
- (2) HGNC
- (3) NCBI Entrez Gene
- (4) UniProtKB/Swiss-Prot
- (5) Ensembl
- (6) OMIM
- (7) GeneLoc
- (8) Gene Wiki
- (9) UCSC
- (10) PhosphoSitePlus
- (11) Cell Signaling Technology
- (12) GO
- (13) UniProtKB/TrEMBL
- (14) InterPro
- (15) ProtoNet
- (16) Blocks
- (17) MGI
- (18) IUBMB
- (19) KEGG
- (20) MINT
- (21) STRING
- (22) IntAct
- (23) Novoseek
- (24) PharmGKB
- (25) DrugBank
- (26) HMDB
- (27) AceView
- (28) ASD
- (29) ECgene
- (30) CGAP SAGE
- (31) SOURCE
- (32) HomoloGene
- (33) PanEnsembl
- (34) euGenes
- (35) SGD
- (36) FlyBase
- (37) WormBase
- (38) Pseudogene
- (39) DGV
- (40) dbSNP
- (41) GenAtlas
- (42) HGMD
- (43) GAD
- (44) BGMUT
- (45) HuGE
- (46) Atlas
- (47) GenBank
- (48) H-invDB
- (49) HORDE
- (50) HUGE
- (51) IMGT
- (52) Leiden
- (53) miRBase
- (54) DME
- (55) OriGene
- (56) PubMed
- (57) R&D Systems
- (58) TGDB
- (59) Tocris
- (60) Abcam
- (61) Novus Biologicals
- (62) ProSpec
- (63) Sino Biological
- (64) GenScript
- (65) Qiagen
- (66) OCA
- (67) Proteopedia
- (68) MOPED
- (69) neXtProt
- (70) Reactome
- (71) GeneGo (Thomson Reuters)
- (72) DISEASES
- (73) SIMAP
- (74) GenomeRNAi
- (75) LifeMap
- (76) miRTarBase
- (77) MalaCards
- (78) Invitrogen
- (79) BitterDB
- (80) ESI-BIO
- (81) RefSeq
- (82) BioSystems
- (83) MaxQB
- (84) IUPHAR
- (85) BioGPS
- (86) Illumina
- (87) COMPARTMENTS
- (88) HOMER
- (89) PaxDb
- (90) ApexBio
- (91) Addgene
- (92) antibodies-online
- (93) CYP
- (94) NONCODE
- (95) TreeFam
- (96) PathCards
- (97) GeneReviews
- (98) GeneTex
- (99) Taconic Biosciences
- (100) GTEx
- (101) ProteomicsDB
- (102) SCBT
- (103) DGIdb
- (104) ClinicalTrials
- (105) RVIS
- (106) SIGNOR
- (107) diseasecard
- (108) NIH Rare Diseases
- (109) Orphanet
- (110) UMLS
- (111) GTR
- (112) Disease Ontology
- (113) Genetics Home Reference
- (114) MeSH
- (115) MedlinePlus
- (116) CDC
- (117) NINDS
- (118) NCBI Bookshelf
- (119) ClinVar
- (120) Gene Damage Index
- (121) HPO
- (122) UDN
- (123) VISTA
- (124) FANTOM5
- (125) ENCODE
- (126) ProSci
- (127) Horizon
- (128) NURSA
- (129) IID
- (130) VectorBuilder
- (131) SNPedia
- (132) BRCA Exchange
- (133) CIViC
- (134) ProteoGenix
- (135) dbSUPER
- (136) TISSUES
- (137) Gene ORGANizer
- (138) abm
- (139) Human Protein Atlas
- (140) GWAS Catalog
- (141) Monarch Initiative
- (142) DataMed
- (143) HumanCyc
- (144) genomics-online
- (145) UCNEbase
- (146) EPDnew
- (147) Applied Biosystems
- (148) GlyConnect
- (149) Aminode
- (150) GeneCopoeia
- (151) GPS-Prot
- (152) RNACentral
- (153) LncRNADisease
- (154) LOVD
- (155) miR2Disease
- (156) DiseaseEnhancer
- (157) Boster Bio
- (158) Biorbyt
- (159) Biocompare
- (160) Mastermind
- (161) CTD^2 Dashboard
- (162) CraniofacialAtlas
- (163) GeneImprint
- (164) Synthego
- (165) Bio Basic
- (166) ENA
- (167) GtRNAdb
- (168) LncBase
- (169) LncBook
- (170) LNCipedia
- (171) LncRNAdb
- (172) Modomics
- (173) PDBe
- (174) Rfam
- (175) SILVA
- (176) snOPY
- (177) SRPDB
- (178) GENCODE
- (179) TarBase
- (180) MyBioSource