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Aliases for LOC102725193 Gene

Subcategory (RNA class) for LOC102725193 Gene

ncRNA

Quality Score for this RNA gene is

13

Aliases for LOC102725193 Gene

  • Uncharacterized LOC102725193 3

External Ids for LOC102725193 Gene

Previous GeneCards Identifiers for LOC102725193 Gene

  • GC01U904092

Summaries for LOC102725193 Gene

GeneCards Summary for LOC102725193 Gene

LOC102725193 (Uncharacterized LOC102725193) is an RNA Gene, and is affiliated with the ncRNA class.

Additional gene information for LOC102725193 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for LOC102725193 Gene

Genomics for LOC102725193 Gene

GeneHancer (GH) Regulatory Elements for LOC102725193 Gene

Promoters and enhancers for LOC102725193 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH01J007388 Enhancer 0.8 Ensembl ENCODE 600.7 +1.2 1222 3.4 RFX1 PRDM10 ZIC2 CTBP1 ZFX BMI1 DPF2 GATAD2B ZFHX2 SIN3A ENSG00000237728 LOC102725193 CAMTA1-IT1 CAMTA1
GH01J007401 Enhancer 1.4 FANTOM5 Ensembl ENCODE 0.4 -11.7 -11737 4.5 ZSCAN21 NCOA3 MAFK ZBTB7A RELA SP7 PRDM1 FOSL2 CREB1 POLR2A NOL9 ENSG00000237728 ENSG00000225126 ENSG00000237365 GC01M007403 LOC102725193 CAMTA1
GH01J007398 Enhancer 0.2 Ensembl 0.4 -9.0 -8978 0.2 ENSG00000225126 ENSG00000237365 GC01M007403 LOC102725193 CAMTA1
GH01J007399 Enhancer 0.2 ENCODE 0.4 -9.3 -9263 0.2 ENSG00000225126 ENSG00000237365 GC01M007403 LOC102725193 CAMTA1
GH01J007404 Enhancer 0.2 Ensembl 0.4 -14.8 -14778 0.2 GC01M007403 ENSG00000237728 ENSG00000225126 LOC102725193 CAMTA1
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LOC102725193 on UCSC Golden Path with GeneCards custom track

Genomic Locations for LOC102725193 Gene

Genomic Locations for LOC102725193 Gene
chr1:7,388,183-7,389,923
(GRCh38/hg38)
Size:
1,741 bases
Orientation:
Minus strand

Genomic View for LOC102725193 Gene

Genes around LOC102725193 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC102725193 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC102725193 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC102725193 Gene

Proteins for LOC102725193 Gene

Post-translational modifications for LOC102725193 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC102725193 Gene

Domains & Families for LOC102725193 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for LOC102725193 Gene

Function for LOC102725193 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC102725193 Gene

Localization for LOC102725193 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC102725193 Gene

Pathways & Interactions for LOC102725193 Gene

PathCards logo

SuperPathways for LOC102725193 Gene

No Data Available

Interacting Proteins for LOC102725193 Gene

Gene Ontology (GO) - Biological Process for LOC102725193 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for LOC102725193 Gene

Drugs & Compounds for LOC102725193 Gene

No Compound Related Data Available

Transcripts for LOC102725193 Gene

mRNA/cDNA for LOC102725193 Gene

(3) Additional mRNA sequences :
(3) RNA Central transcripts :

Alternative Splicing Database (ASD) splice patterns (SP) for LOC102725193 Gene

No ASD Table

Relevant External Links for LOC102725193 Gene

GeneLoc Exon Structure for
LOC102725193

Expression for LOC102725193 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC102725193 Gene

Orthologs for LOC102725193 Gene

No data available for Orthologs and Evolution for LOC102725193 Gene

Paralogs for LOC102725193 Gene

No data available for Paralogs for LOC102725193 Gene

Variants for LOC102725193 Gene

Sequence variations from dbSNP and Humsavar for LOC102725193 Gene

SNP ID Clin Chr 01 pos Variation AA Info Type
rs1000053009 -- 7,391,053(-) A/G upstream_transcript_variant
rs1000909054 -- 7,384,995(-) T/G genic_downstream_transcript_variant, intron_variant
rs1000920631 -- 7,385,121(-) G/A genic_downstream_transcript_variant, intron_variant
rs1001058846 -- 7,389,955(-) T/C upstream_transcript_variant
rs1001447792 -- 7,382,005(-) A/G downstream_transcript_variant

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC102725193 Gene

Disorders for LOC102725193 Gene

No disorders were found for LOC102725193 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC102725193 Gene

Publications for LOC102725193 Gene

No publications were found for LOC102725193 Gene.

No data available for External Links for LOC102725193 Gene

Products for LOC102725193 Gene

Sources for LOC102725193 Gene

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