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Aliases for LOC102725082 Gene

Subcategory (RNA class) for LOC102725082 Gene

ncRNA

Quality Score for this RNA gene is

13

Aliases for LOC102725082 Gene

  • Uncharacterized LOC102725082 3

External Ids for LOC102725082 Gene

Previous GeneCards Identifiers for LOC102725082 Gene

  • GC02U902919

Summaries for LOC102725082 Gene

GeneCards Summary for LOC102725082 Gene

LOC102725082 (Uncharacterized LOC102725082) is an RNA Gene, and is affiliated with the ncRNA class.

Additional gene information for LOC102725082 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for LOC102725082 Gene

Genomics for LOC102725082 Gene

GeneHancer (GH) Regulatory Elements for LOC102725082 Gene

Promoters and enhancers for LOC102725082 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH02J212997 Enhancer 0.2 Ensembl 600.7 -1.3 -1329 0.4 LOC102725082 ENSG00000273118
GH02J213014 Promoter/Enhancer 1.5 Ensembl ENCODE dbSUPER 0.4 -19.3 -19279 2.5 SP1 ZNF687 JUND RELA CREM MLLT1 ZBED1 IKZF1 CEBPG BACH1 ENSG00000270659 ENSG00000273118 LOC102725082 IKZF2
GH02J213021 Enhancer 1.2 Ensembl ENCODE dbSUPER 0.3 -25.0 -25041 3.8 ZNF687 JUND RELA CREM MLLT1 ZBED1 IKZF1 POLR2A BACH1 IKZF2 ENSG00000273118 ENSG00000270659 GC02M213019 LOC102725082 IKZF2
GH02J212954 Enhancer 1.2 FANTOM5 Ensembl ENCODE dbSUPER 0.3 +38.1 38108 7.2 TARDBP CTBP1 RUNX3 PKNOX1 ZNF217 DPF2 GATA3 SIX4 POLR2A SMARCE1 IKZF2 GC02P212981 MIR4776-2 LOC102725082 ENSG00000273118
GH02J212999 Enhancer 0.5 UCNEbase 0.7 -3.4 -3356 0.2 TARDBP LOC102725082 ENSG00000273118 IKZF2
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LOC102725082 on UCSC Golden Path with GeneCards custom track

Genomic Locations for LOC102725082 Gene

Genomic Locations for LOC102725082 Gene
chr2:212,926,386-212,996,462
(GRCh38/hg38)
Size:
70,077 bases
Orientation:
Minus strand

Genomic View for LOC102725082 Gene

Genes around LOC102725082 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC102725082 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC102725082 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC102725082 Gene

Proteins for LOC102725082 Gene

Post-translational modifications for LOC102725082 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC102725082 Gene

Domains & Families for LOC102725082 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for LOC102725082 Gene

Function for LOC102725082 Gene

Phenotypes From GWAS Catalog for LOC102725082 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC102725082 Gene

Localization for LOC102725082 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC102725082 Gene

Pathways & Interactions for LOC102725082 Gene

PathCards logo

SuperPathways for LOC102725082 Gene

No Data Available

Interacting Proteins for LOC102725082 Gene

Gene Ontology (GO) - Biological Process for LOC102725082 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for LOC102725082 Gene

Drugs & Compounds for LOC102725082 Gene

No Compound Related Data Available

Transcripts for LOC102725082 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for LOC102725082 Gene

No ASD Table

Relevant External Links for LOC102725082 Gene

GeneLoc Exon Structure for
LOC102725082

No data available for mRNA/cDNA for LOC102725082 Gene

Expression for LOC102725082 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC102725082 Gene

Orthologs for LOC102725082 Gene

No data available for Orthologs and Evolution for LOC102725082 Gene

Paralogs for LOC102725082 Gene

No data available for Paralogs for LOC102725082 Gene

Variants for LOC102725082 Gene

Sequence variations from dbSNP and Humsavar for LOC102725082 Gene

SNP ID Clin Chr 02 pos Variation AA Info Type
rs1000089094 -- 212,963,018(-) T/A intron_variant
rs1000115733 -- 212,933,317(-) T/A/G downstream_transcript_variant
rs1000116946 -- 212,971,591(-) T/C intron_variant
rs1000172219 -- 212,978,906(-) T/C intron_variant
rs1000184502 -- 212,973,337(-) C/T intron_variant

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC102725082 Gene

Disorders for LOC102725082 Gene

No disorders were found for LOC102725082 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC102725082 Gene

Publications for LOC102725082 Gene

No publications were found for LOC102725082 Gene.

No data available for External Links for LOC102725082 Gene

Products for LOC102725082 Gene

Sources for LOC102725082 Gene

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