Aliases for LOC102724957 Gene
Aliases for LOC102724957 Gene
External Ids for LOC102724957 Gene
- Entrez Gene: 102724957
- Ensembl: ENSG00000254695
Summaries for LOC102724957 Gene
GeneCards Summary for LOC102724957 Gene
LOC102724957 (Uncharacterized LOC102724957) is a Protein Coding gene.
Additional gene information for LOC102724957 Gene
No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for LOC102724957 Gene
Genomics for LOC102724957 Gene
GeneHancer (GH) Regulatory Elements for LOC102724957 Gene
Promoters and enhancers for LOC102724957 Gene
| GeneHancer (GH) Identifier | GH Type | GH Score |
GH Sources | Gene Association Score | Total Score | TSS distance (kb) | Number of Genes Away | Size (kb) | Transcription Factor Binding Sites |
Gene Targets |
|---|---|---|---|---|---|---|---|---|---|---|
| GH11J015621 | Promoter/Enhancer | 1 | Ensembl ENCODE | 600.7 | -1.8 | -1814 | 2.3 | POLR2A RXRA SP1 EZH2 NR2F2 RCOR1 | GC11P015625 LOC102724957 ENSG00000254789 LOC105376568 GC11M015430 PIR52074 | |
| GH11J015624 | Enhancer | 0.9 | FANTOM5 Ensembl ENCODE | 600.7 | +1.6 | 1635 | 2.4 | NFE2 CREB1 MAFG CTCF ATF2 | LOC102724957 LOC105376568 GC11M015430 | |
| GH11J015623 | Enhancer | 0.3 | FANTOM5 | 600.7 | 0.0 | -37 | 0.4 | ZNF10 | LOC102724957 ENSG00000254789 GC11P015625 LOC105376568 GC11M015430 | |
| GH11J015626 | Enhancer | 0.3 | FANTOM5 | 600.7 | +0.3 | 269 | 0.2 | LOC105376568 GC11P015625 ENSG00000254789 LOC102724957 GC11M015430 | ||
| GH11J015634 | Enhancer | 0.8 | FANTOM5 Ensembl ENCODE | 0.4 | +13.2 | 13220 | 4 | POLR2A | GC11M015430 LOC102724957 ENSG00000254645 |
- Elite GeneHancer and/or Elite GeneHancer-gene association
Download GeneHancer data from 2017 publication |
Request up-to-date GeneHancer data (full dataset)
GeneHancers around LOC102724957 on UCSC Golden Path with GeneCards custom track
Genomic Locations for LOC102724957 Gene
Genomic Locations for LOC102724957 Gene
- chr11:15,623,774-15,705,368
- (GRCh38/hg38)
- Size:
- 81,595 bases
- Orientation:
- Plus strand
- chr11:15,665,431-15,726,914
- (GRCh37/hg19)
- Size:
- 61,484 bases
- Orientation:
- Plus strand
Genomic View for LOC102724957 Gene
Genes around LOC102724957 on UCSC Golden Path with GeneCards custom track
- Cytogenetic band:
-
- 11p15.2 by Entrez Gene
- 11p15.2 by Ensembl
LOC102724957 Gene in genomic location: bands according to
Ensembl, locations according to GeneLoc
(and/or Entrez Gene and/or Ensembl if different)
Genomic Neighborhood
• Exon Structure
• Gene Density
RefSeq DNA sequence for LOC102724957 Gene
Proteins for LOC102724957 Gene
Post-translational modifications for LOC102724957 Gene
No Post-translational modifications
Other Protein References for LOC102724957 Gene
- REFSEQ proteins:
Antibody Products
Protein Products
- Search Origene for Purified Proteins, MassSpec and Protein Over-expression Lysates for LOC102724957
- Origene Custom Protein Services for LOC102724957
No data available for DME Specific Peptides for LOC102724957 Gene
Domains & Families for LOC102724957 Gene
Graphical View of Domain Structure for InterPro Entry
No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for LOC102724957 Gene
Function for LOC102724957 Gene
Phenotypes From GWAS Catalog for LOC102724957 Gene
Animal Model Products
- Taconic Biosciences: Generate A Custom CRISPR Mouse Model For Your Study
- Cyagen custom Knockout/knockin (KOKI) mouse models for LOC102724957
-
CRISPR Products
- Browse CRISPR knockouts for LOC102724957
- Search GeneCopoeia for CRISPR/Cas9 clones, lentivirus and AAV products for LOC102724957
miRNA Products
Inhibitory RNA Products
- Search GeneCopoeia for shRNA, lentivirus and/or AAV clone products for LOC102724957
Clone Products
- Search GeneCopoeia for ORF cDNA, lentivirus, AAV viral particles and/or promoter clone products for LOC102724957
No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC102724957 Gene
Localization for LOC102724957 Gene
No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC102724957 Gene
Transcripts for LOC102724957 Gene
mRNA/cDNA for LOC102724957 Gene
- (1) REFSEQ mRNAs :
- (1) Additional mRNA sequences :
- (1) Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :
-
- ENST00000532242 471 bps (ENST00000532242.1)
- (1) RNA Central transcripts :
CRISPR Products
- Browse CRISPR knockouts for LOC102724957
- Search GeneCopoeia for CRISPR/Cas9 clones, lentivirus and AAV products for LOC102724957
miRNA Products
Inhibitory RNA Products
- Search GeneCopoeia for shRNA, lentivirus and/or AAV clone products for LOC102724957
Clone Products
- Search GeneCopoeia for ORF cDNA, lentivirus, AAV viral particles and/or promoter clone products for LOC102724957
Relevant External Links for LOC102724957 Gene
- GeneLoc Exon Structure for
- LOC102724957
Expression for LOC102724957 Gene
No Expression Related Data Available
Primer Products
Gene Expression Assay Products
No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC102724957 Gene
Orthologs for LOC102724957 Gene
No data available for Orthologs for LOC102724957 Gene
Paralogs for LOC102724957 Gene
No data available for Paralogs for LOC102724957 Gene
Variants for LOC102724957 Gene
| SNP ID | Clin | Chr 11 pos | Variation | AA Info | Type |
|---|---|---|---|---|---|
| rs1000012028 | -- | 15,671,078(+) | C/T | intron_variant | |
| rs1000026865 | -- | 15,636,611(+) | G/A | genic_upstream_transcript_variant, intron_variant | |
| rs1000033168 | -- | 15,686,448(+) | G/A | intron_variant | |
| rs1000069948 | -- | 15,687,742(+) | T/C | intron_variant | |
| rs1000080542 | -- | 15,633,500(+) | C/T | genic_upstream_transcript_variant, intron_variant |
SNP Genotyping and Copy Number Assay Products
No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Variation tolerance and Additional Variant Information for LOC102724957 Gene
Disorders for LOC102724957 Gene
No disorders were found for LOC102724957 Gene.
No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC102724957 Gene
Publications for LOC102724957 Gene
- Multistage genome-wide association meta-analyses identified two new loci for bone mineral density. (PMID: 24249740) Zhang L … Deng HW (Human molecular genetics 2014) 3 58
- Genome-wide meta-analysis identifies 56 bone mineral density loci and reveals 14 loci associated with risk of fracture. (PMID: 22504420) Estrada K … Rivadeneira F (Nature genetics 2012) 3 58
- Twenty bone-mineral-density loci identified by large-scale meta-analysis of genome-wide association studies. (PMID: 19801982) Rivadeneira F … Genetic Factors for Osteoporosis (GEFOS) Consortium (Nature genetics 2009) 3 58
Products for LOC102724957 Gene
- Browse OriGene Antibodies
- Custom Antibody Services
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- Custom Assay Services
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- Origene Custom Protein Services for LOC102724957
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- Browse OriGene qPCR primer pairs and template standards
- Browse CRISPR knockouts for LOC102724957
- Custom cloning services - gene synthesis, subcloning, mutagenesis, variant library, vector shuttling
- Browse OriGene miRNA Products For LOC102724957
- Browse Sino Biological cDNA Clones
- Browse Sino Biological Recombinant Proteins
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- High-throughput Antibody Production Service
- Protein Production Service
- Epitope Tag Antibodies & Reporter Protein Antibodies
- Lentiviral ORF Clones
- Cyagen custom Knockout/knockin (KOKI) mouse models for LOC102724957
- Browse GeneCopoeia Cell Lines
- Search GeneCopoeia for CRISPR/Cas9 clones, lentivirus and AAV products for LOC102724957
- Search GeneCopoeia for ORF cDNA, lentivirus, AAV viral particles and/or promoter clone products for LOC102724957
- Search GeneCopoeia for miRNA 3'UTR Target clone products for LOC102724957
- Search GeneCopoeia for shRNA, lentivirus and/or AAV clone products for LOC102724957
Sources for LOC102724957 Gene
- (1) GeneCards
- (2) HGNC
- (3) EntrezGene
- (4) Swiss-Prot
- (5) Ensembl
- (6) OMIM
- (7) GeneLoc
- (8) Gene Wiki
- (9) UCSC
- (10) PhosphoSitePlus
- (11) Cell Signaling Technology
- (12) GO
- (13) TrEMBL
- (14) InterPro
- (15) ProtoNet
- (16) Blocks
- (17) MGI
- (18) IUBMB
- (19) KEGG
- (20) MINT
- (21) STRING
- (22) IntAct
- (23) Novoseek
- (24) PharmGKB
- (25) DrugBank
- (26) HMDB
- (27) UniGene
- (28) AceView
- (29) ASD
- (30) ECgene
- (31) GeneAnnot
- (32) CGAP SAGE
- (33) SOURCE
- (34) HomoloGene
- (35) PanEnsembl
- (36) euGenes
- (37) SGD
- (38) FlyBase
- (39) WormBase
- (40) Pseudogene
- (41) DGV
- (42) dbSNP
- (43) GenAtlas
- (44) HGMD
- (45) GAD
- (46) BGMUT
- (47) HuGE
- (48) Atlas
- (49) GenBank
- (50) H-invDB
- (51) HORDE
- (52) HUGE
- (53) IMGT
- (54) Leiden
- (55) miRBase
- (56) DME
- (57) OriGene
- (58) PubMed
- (59) R&D Systems
- (60) TGDB
- (61) Tocris
- (62) Abcam
- (63) Novus Biologicals
- (64) ProSpec
- (65) Sino Biological
- (66) GenScript
- (67) Qiagen
- (68) OCA
- (69) Proteopedia
- (70) MOPED
- (71) neXtProt
- (72) Reactome
- (73) GeneGo (Thomson Reuters)
- (74) fRNAdb
- (75) DISEASES
- (76) SIMAP
- (77) GenomeRNAi
- (78) LifeMap
- (79) miRTarBase
- (80) MalaCards
- (81) Invitrogen
- (82) BitterDB
- (83) ESI-BIO
- (84) RefSeq
- (85) BioSystems
- (86) MaxQB
- (87) IUPHAR
- (88) BioGPS
- (89) Illumina
- (90) COMPARTMENTS
- (91) HOMER
- (92) PaxDb
- (93) ApexBio
- (94) Addgene
- (95) antibodies-online
- (96) CYP
- (97) NONCODE
- (98) SwitchGear Genomics
- (99) TreeFam
- (100) PathCards
- (101) GeneReviews
- (102) GeneTex
- (103) Taconic Biosciences
- (104) GTEx
- (105) ProteomicsDB
- (106) SCBT
- (107) DGIdb
- (108) ClinicalTrials
- (109) FDA Approved Drugs
- (110) RVIS
- (111) SIGNOR
- (112) diseasecard
- (113) NIH Rare Diseases
- (114) Orphanet
- (115) UMLS
- (116) GTR
- (117) Disease Ontology
- (118) Genetics Home Reference
- (119) MeSH
- (120) MedlinePlus
- (121) CDC
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- (123) NCBI Bookshelf
- (124) ClinVar
- (125) Gene Damage Index
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- (127) HPO
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- (131) ENCODE
- (132) ProSci
- (133) Horizon
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- (136) Cyagen
- (137) VectorBuilder
- (138) SNPedia
- (139) BRCA Exchange
- (140) St John's Lab
- (141) CIViC
- (142) ProteoGenix
- (143) dbSUPER
- (144) TISSUES
- (145) Gene ORGANizer
- (146) abm
- (147) CrownBio
- (148) Human Protein Atlas
- (149) GWAS Catalog
- (150) Monarch Initiative
- (151) DataMed
- (152) HumanCyc
- (153) genomics-online
- (154) UCNEbase
- (155) EPDnew
- (156) Applied Biosystems
- (157) GlyConnect
- (158) Aminode
- (159) GeneCopoeia
- (160) GPS-Prot
- (161) RNACentral
- (162) LncRNADisease
- (163) LOVD
- (164) miR2Disease
- (165) DiseaseEnhancer
- (166) Boster Bio
- (167) Biorbyt
- (168) Biocompare
- (169) Mastermind