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Aliases for LOC102724943 Gene

Subcategory (RNA class) for LOC102724943 Gene

ncRNA

Quality Score for this RNA gene is

13

Aliases for LOC102724943 Gene

  • Uncharacterized LOC102724943 3

External Ids for LOC102724943 Gene

Previous GeneCards Identifiers for LOC102724943 Gene

  • GC05U901919
  • GC05P006775

Summaries for LOC102724943 Gene

GeneCards Summary for LOC102724943 Gene

LOC102724943 (Uncharacterized LOC102724943) is an RNA Gene, and is affiliated with the ncRNA class.

Additional gene information for LOC102724943 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for LOC102724943 Gene

Genomics for LOC102724943 Gene

GeneHancer (GH) Regulatory Elements for LOC102724943 Gene

Promoters and enhancers for LOC102724943 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH05J006764 Promoter/Enhancer 1.7 FANTOM5 Ensembl ENCODE 600.7 +0.6 581 3.3 CTCF NFIB MYC YY1 RAD21 HDGF CREB1 GLIS2 NRF1 ZNF600 LINC02236 LOC102724943 TENT4A LINC02102 SRD5A1 GC05M006767
GH05J006774 Promoter/Enhancer 1.1 FANTOM5 Ensembl 0.4 +9.0 9000 0.6 MAFK ZNF316 MAFG CEBPB BHLHE40 PIR43551 SRD5A1 ENSG00000272071 LOC102724943 LINC02236
GH05J006773 Promoter 0.7 Ensembl 0.4 +7.6 7591 0.6 RFX1 KLF17 PIR43551 ENSG00000272071 LOC102724943 LINC02236
GH05J006775 Promoter 0.5 Ensembl 0.4 +9.6 9591 0.2 PIR43551 ENSG00000272071 LOC102724943 LINC02236
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LOC102724943 on UCSC Golden Path with GeneCards custom track

Genomic Locations for LOC102724943 Gene

Genomic Locations for LOC102724943 Gene
chr5:6,765,910-6,777,775
(GRCh38/hg38)
Size:
11,866 bases
Orientation:
Plus strand

Genomic View for LOC102724943 Gene

Genes around LOC102724943 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC102724943 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC102724943 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC102724943 Gene

Proteins for LOC102724943 Gene

Post-translational modifications for LOC102724943 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC102724943 Gene

Domains & Families for LOC102724943 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for LOC102724943 Gene

Function for LOC102724943 Gene

Phenotypes From GWAS Catalog for LOC102724943 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC102724943 Gene

Localization for LOC102724943 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC102724943 Gene

Pathways & Interactions for LOC102724943 Gene

PathCards logo

SuperPathways for LOC102724943 Gene

No Data Available

Interacting Proteins for LOC102724943 Gene

Gene Ontology (GO) - Biological Process for LOC102724943 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for LOC102724943 Gene

Drugs & Compounds for LOC102724943 Gene

No Compound Related Data Available

Transcripts for LOC102724943 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for LOC102724943 Gene

No ASD Table

Relevant External Links for LOC102724943 Gene

GeneLoc Exon Structure for
LOC102724943

No data available for mRNA/cDNA for LOC102724943 Gene

Expression for LOC102724943 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC102724943 Gene

Orthologs for LOC102724943 Gene

No data available for Orthologs and Evolution for LOC102724943 Gene

Paralogs for LOC102724943 Gene

No data available for Paralogs for LOC102724943 Gene

Variants for LOC102724943 Gene

Sequence variations from dbSNP and Humsavar for LOC102724943 Gene

SNP ID Clin Chr 05 pos Variation AA Info Type
rs1000066584 -- 6,767,269(+) T/G genic_upstream_transcript_variant, intron_variant, upstream_transcript_variant
rs1000531123 -- 6,769,269(+) C/T intron_variant, non_coding_transcript_variant
rs1000674406 -- 6,780,331(+) T/C genic_downstream_transcript_variant, non_coding_transcript_variant
rs1000790196 -- 6,780,628(+) C/T genic_downstream_transcript_variant, non_coding_transcript_variant
rs1000911088 -- 6,772,416(+) C/T intron_variant, non_coding_transcript_variant

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC102724943 Gene

Disorders for LOC102724943 Gene

No disorders were found for LOC102724943 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC102724943 Gene

Publications for LOC102724943 Gene

No publications were found for LOC102724943 Gene.

No data available for External Links for LOC102724943 Gene

Products for LOC102724943 Gene

Sources for LOC102724943 Gene

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