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Aliases for LOC102724916 Gene

Subcategory (RNA class) for LOC102724916 Gene

ncRNA

Quality Score for this RNA gene is

13

Aliases for LOC102724916 Gene

  • Uncharacterized LOC102724916 3

External Ids for LOC102724916 Gene

Previous GeneCards Identifiers for LOC102724916 Gene

  • GC04U901784

Summaries for LOC102724916 Gene

GeneCards Summary for LOC102724916 Gene

LOC102724916 (Uncharacterized LOC102724916) is an RNA Gene, and is affiliated with the ncRNA class.

Additional gene information for LOC102724916 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for LOC102724916 Gene

Genomics for LOC102724916 Gene

GeneHancer (GH) Regulatory Elements for LOC102724916 Gene

Promoters and enhancers for LOC102724916 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH04J077927 Enhancer 1.2 Ensembl ENCODE dbSUPER 0.3 +24.3 24301 1.2 ELF3 HNF1A MZF1 ZNF221 ZNF561 CEBPB ZBTB44 ZXDB ZSCAN5C OSR2 CNOT6L RPL7P17 LOC102724916 ENSG00000250214 MRPL1
GH04J077920 Enhancer 1.2 Ensembl ENCODE dbSUPER 0.3 +30.4 30391 3.8 ELF3 CEBPG ELF1 ZNF384 ZNF644 FOSL2 POLR2A CEBPA GATAD2A RCOR2 CNOT6L HMGB1P44 LOC102724916 ENSG00000250214 MRPL1
GH04J077930 Enhancer 0.8 Ensembl ENCODE dbSUPER 0.3 +20.8 20812 1.9 FOS JUN CNOT6L HMGB1P44 LOC102724916 ENSG00000250214 MRPL1
GH04J077880 Enhancer 1 Ensembl ENCODE 0.2 +70.8 70761 2.7 ELF3 CEBPG MAFK ZNF644 KAT8 FOSL2 CEBPA GATAD2A RXRB CTBP1 CNOT6L FRAS1 HMGB1P44 ENSG00000250214 MRPL1 LOC102724916
GH04J077926 Enhancer 0.4 Ensembl dbSUPER 0.3 +26.1 26109 0.4 CNOT6L LOC102724916 MRPL1 ENSG00000250214
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LOC102724916 on UCSC Golden Path with GeneCards custom track

Genomic Locations for LOC102724916 Gene

Genomic Locations for LOC102724916 Gene
chr4:77,918,053-77,952,510
(GRCh38/hg38)
Size:
34,458 bases
Orientation:
Minus strand

Genomic View for LOC102724916 Gene

Genes around LOC102724916 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC102724916 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC102724916 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC102724916 Gene

Proteins for LOC102724916 Gene

Post-translational modifications for LOC102724916 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC102724916 Gene

Domains & Families for LOC102724916 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for LOC102724916 Gene

Function for LOC102724916 Gene

Phenotypes From GWAS Catalog for LOC102724916 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC102724916 Gene

Localization for LOC102724916 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC102724916 Gene

Pathways & Interactions for LOC102724916 Gene

PathCards logo

SuperPathways for LOC102724916 Gene

No Data Available

Interacting Proteins for LOC102724916 Gene

Gene Ontology (GO) - Biological Process for LOC102724916 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for LOC102724916 Gene

Drugs & Compounds for LOC102724916 Gene

No Compound Related Data Available

Transcripts for LOC102724916 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for LOC102724916 Gene

No ASD Table

Relevant External Links for LOC102724916 Gene

GeneLoc Exon Structure for
LOC102724916

No data available for mRNA/cDNA for LOC102724916 Gene

Expression for LOC102724916 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC102724916 Gene

Orthologs for LOC102724916 Gene

No data available for Orthologs and Evolution for LOC102724916 Gene

Paralogs for LOC102724916 Gene

No data available for Paralogs for LOC102724916 Gene

Variants for LOC102724916 Gene

Sequence variations from dbSNP and Humsavar for LOC102724916 Gene

SNP ID Clin Chr 04 pos Variation AA Info Type
rs1000020507 -- 77,950,361(-) A/G genic_upstream_transcript_variant, intron_variant
rs1000032632 -- 77,920,518(-) G/A genic_downstream_transcript_variant, intron_variant
rs1000173479 -- 77,923,342(-) C/T genic_downstream_transcript_variant, intron_variant
rs1000236852 -- 77,928,811(-) TTATTAT/TTAT genic_downstream_transcript_variant, intron_variant
rs1000480944 -- 77,942,561(-) A/C genic_upstream_transcript_variant, intron_variant

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC102724916 Gene

Disorders for LOC102724916 Gene

No disorders were found for LOC102724916 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC102724916 Gene

Publications for LOC102724916 Gene

No publications were found for LOC102724916 Gene.

No data available for External Links for LOC102724916 Gene

Products for LOC102724916 Gene

Sources for LOC102724916 Gene

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