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Aliases for LOC102724892 Gene

Subcategory (RNA class) for LOC102724892 Gene

ncRNA

Quality Score for this RNA gene is

13

Aliases for LOC102724892 Gene

  • Uncharacterized LOC102724892 3

External Ids for LOC102724892 Gene

Previous GeneCards Identifiers for LOC102724892 Gene

  • GC01U904166

Summaries for LOC102724892 Gene

GeneCards Summary for LOC102724892 Gene

LOC102724892 (Uncharacterized LOC102724892) is an RNA Gene, and is affiliated with the ncRNA class.

Additional gene information for LOC102724892 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for LOC102724892 Gene

Genomics for LOC102724892 Gene

GeneHancer (GH) Regulatory Elements for LOC102724892 Gene

Promoters and enhancers for LOC102724892 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH01J084846 Enhancer 1.5 FANTOM5 Ensembl ENCODE dbSUPER 0.3 -49.9 -49857 2.2 NFIB ZSCAN21 MYC SP7 SP1 IKZF1 POLR2A ZBTB8A ZNF600 PRDM10 LPAR3 MCOLN2 GNG5 BCL10 C1orf52 LOC102724892
GH01J084782 Enhancer 0.9 ENCODE 0.4 +15.0 14991 0.2 CTCF ZNF148 ZSCAN21 YY1 SP7 KLF14 SP5 PRDM1 MZF1 ZNF680 LPAR3 ENSG00000285325 LOC102724892 GC01P084753
GH01J084833 Enhancer 1.3 Ensembl ENCODE dbSUPER 0.3 -37.4 -37408 3.7 ZNF384 ZSCAN21 SP7 MZF1 FOSL2 PKNOX1 ZNF600 PRDM10 ZSCAN4 ZEB2 ENSG00000271576 LOC102724892 LPAR3
GH01J084853 Enhancer 1.3 FANTOM5 ENCODE dbSUPER 0.2 -56.8 -56847 2.7 BACH1 CREM MLLT1 ZBED1 IKZF1 CREB1 PKNOX1 IKZF2 TRIM22 HDAC1 LPAR3 BCL10 GNG5 MCOLN2 C1orf52 LOC102724892
GH01J084892 Promoter/Enhancer 1.9 EPDnew Ensembl ENCODE 0.2 -95.3 -95257 1.8 ZNF121 ZSCAN21 SP7 ZNF404 ZNF680 ZNF560 ZNF547 GLIS2 ZBTB8A ZNF600 LPAR3 ENSG00000271576 ZNHIT6 LOC102724892
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LOC102724892 on UCSC Golden Path with GeneCards custom track

Genomic Locations for LOC102724892 Gene

Genomic Locations for LOC102724892 Gene
chr1:84,781,006-84,797,644
(GRCh38/hg38)
Size:
16,639 bases
Orientation:
Minus strand

Genomic View for LOC102724892 Gene

Genes around LOC102724892 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC102724892 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC102724892 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC102724892 Gene

Proteins for LOC102724892 Gene

Post-translational modifications for LOC102724892 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC102724892 Gene

Domains & Families for LOC102724892 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for LOC102724892 Gene

Function for LOC102724892 Gene

Phenotypes From GWAS Catalog for LOC102724892 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC102724892 Gene

Localization for LOC102724892 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC102724892 Gene

Pathways & Interactions for LOC102724892 Gene

PathCards logo

SuperPathways for LOC102724892 Gene

No Data Available

Interacting Proteins for LOC102724892 Gene

Gene Ontology (GO) - Biological Process for LOC102724892 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for LOC102724892 Gene

Drugs & Compounds for LOC102724892 Gene

No Compound Related Data Available

Transcripts for LOC102724892 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for LOC102724892 Gene

No ASD Table

Relevant External Links for LOC102724892 Gene

GeneLoc Exon Structure for
LOC102724892

No data available for mRNA/cDNA for LOC102724892 Gene

Expression for LOC102724892 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC102724892 Gene

Orthologs for LOC102724892 Gene

No data available for Orthologs and Evolution for LOC102724892 Gene

Paralogs for LOC102724892 Gene

No data available for Paralogs for LOC102724892 Gene

Variants for LOC102724892 Gene

Sequence variations from dbSNP and Humsavar for LOC102724892 Gene

SNP ID Clin Chr 01 pos Variation AA Info Type
rs1000235453 -- 84,794,384(-) T/C intron_variant
rs1000458966 -- 84,781,493(-) A/C/G non_coding_transcript_variant
rs1000576102 -- 84,798,775(-) C/T upstream_transcript_variant
rs1000666882 -- 84,789,404(-) T/A/C intron_variant
rs1000773408 -- 84,783,367(-) G/A intron_variant

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC102724892 Gene

Disorders for LOC102724892 Gene

No disorders were found for LOC102724892 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC102724892 Gene

Publications for LOC102724892 Gene

No publications were found for LOC102724892 Gene.

No data available for External Links for LOC102724892 Gene

Products for LOC102724892 Gene

Sources for LOC102724892 Gene

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