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Aliases for LOC102724889 Gene

Subcategory (RNA class) for LOC102724889 Gene


Quality Score for this RNA gene is


Aliases for LOC102724889 Gene

  • Uncharacterized LOC102724889 3
  • Novel Transcript, Antisense To ZNF165 5
  • AL121944.1 5

External Ids for LOC102724889 Gene

Previous GeneCards Identifiers for LOC102724889 Gene

  • GC06U902544
  • GC06M028079
  • GC06M028180
  • GC06M028081
  • GC06M028113
  • GC06M028138
  • GC06M028159

Summaries for LOC102724889 Gene

GeneCards Summary for LOC102724889 Gene

LOC102724889 (Uncharacterized LOC102724889) is an RNA Gene, and is affiliated with the ncRNA class.

Additional gene information for LOC102724889 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for LOC102724889 Gene

Genomics for LOC102724889 Gene

GeneHancer (GH) Regulatory Elements for LOC102724889 Gene

Promoters and enhancers for LOC102724889 Gene
GeneHancer (GH) Identifier GH Type GH
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH06J028079 Promoter/Enhancer 2.1 EPDnew Ensembl ENCODE 600.7 +0.5 508 3.1 ZNF652 ZFX SP1 CC2D1A ELF3 MNT SIX5 CBFA2T2 NKRF MLLT1 ZNF165 LOC102724889 ZNF603P ZKSCAN8 ZKSCAN3 ZSCAN12 ZSCAN9 ZKSCAN4 PGBD1 OR2B8P
GH06J028258 Promoter/Enhancer 1.6 EPDnew Ensembl ENCODE 8.8 -178.2 -178226 1.6 IKZF1 IKZF2 EED GABPA EGR1 MAX ZBTB33 ETV6 ZKSCAN4 NKAPL ZNF603P ZNF192P1 ZSCAN31 LOC102724889 ZNF391 ZSCAN26
GH06J028266 Promoter/Enhancer 2.1 EPDnew Ensembl ENCODE 5 -187.1 -187052 4.1 ZNF652 CC2D1A ZFX ELF3 ZKSCAN8 ZNF148 NKRF MLLT1 ZNF121 CEBPG ZSCAN26 ENSG00000276302 ZSCAN12 ZKSCAN3 ZKSCAN8 ZSCAN31 ZKSCAN4 ZNF603P PGBD1 ZNF391
GH06J028349 Promoter/Enhancer 2.3 EPDnew Ensembl ENCODE dbSUPER 4.2 -269.5 -269478 3.3 ZNF652 CC2D1A ZFX ELF3 ZKSCAN8 ZNF148 NKRF POLR2A MLLT1 CEBPG ZKSCAN3 ZKSCAN4 ZKSCAN8 ZSCAN9 ZSCAN23 ZSCAN12 ZNF391 ZSCAN31 ZSCAN26 TRIM27
GH06J027388 Promoter/Enhancer 1.6 Ensembl ENCODE 3.7 +692.0 691974 2.8 ZNF652 SP1 CC2D1A ZFX ELF3 POLR2A MLLT1 ZNF121 CEBPG GTF2F1 GC06M027388 GC06P027641 ZKSCAN3 ZNF391 ZKSCAN8 ZNF204P ABT1 PGBD1 ZSCAN9 ZKSCAN4
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LOC102724889 on UCSC Golden Path with GeneCards custom track

Genomic Locations for LOC102724889 Gene

Genomic Locations for LOC102724889 Gene
2,385 bases
Minus strand

Genomic View for LOC102724889 Gene

Genes around LOC102724889 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC102724889 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC102724889 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC102724889 Gene

Proteins for LOC102724889 Gene

Post-translational modifications for LOC102724889 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC102724889 Gene

Domains & Families for LOC102724889 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for LOC102724889 Gene

Function for LOC102724889 Gene

Phenotypes From GWAS Catalog for LOC102724889 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC102724889 Gene

Localization for LOC102724889 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC102724889 Gene

Pathways & Interactions for LOC102724889 Gene

PathCards logo

SuperPathways for LOC102724889 Gene

No Data Available

Interacting Proteins for LOC102724889 Gene

Gene Ontology (GO) - Biological Process for LOC102724889 Gene


No data available for Pathways by source and SIGNOR curated interactions for LOC102724889 Gene

Drugs & Compounds for LOC102724889 Gene

No Compound Related Data Available

Transcripts for LOC102724889 Gene

mRNA/cDNA for LOC102724889 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :
(1) RNA Central transcripts :

Alternative Splicing Database (ASD) splice patterns (SP) for LOC102724889 Gene

No ASD Table

Relevant External Links for LOC102724889 Gene

GeneLoc Exon Structure for

Expression for LOC102724889 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC102724889 Gene

Orthologs for LOC102724889 Gene

Evolution for LOC102724889 Gene

Gene Tree for LOC102724889 (if available)
Gene Tree for LOC102724889 (if available)

No data available for Orthologs for LOC102724889 Gene

Paralogs for LOC102724889 Gene

No data available for Paralogs for LOC102724889 Gene

Variants for LOC102724889 Gene

Sequence variations from dbSNP and Humsavar for LOC102724889 Gene

SNP ID Clin Chr 06 pos Variation AA Info Type
rs1001106057 -- 28,079,072(-) C/A intron_variant
rs1002758034 -- 28,082,708(-) T/C/G upstream_transcript_variant
rs1002834674 -- 28,081,095(-) C/A non_coding_transcript_variant
rs1003431734 -- 28,082,552(-) T/A upstream_transcript_variant
rs1004430486 -- 28,080,524(-) C/T intron_variant

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC102724889 Gene

Disorders for LOC102724889 Gene

No disorders were found for LOC102724889 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC102724889 Gene

Publications for LOC102724889 Gene

No publications were found for LOC102724889 Gene.

No data available for External Links for LOC102724889 Gene

Products for LOC102724889 Gene

Sources for LOC102724889 Gene

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