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Aliases for LOC102724857 Gene

Subcategory (RNA class) for LOC102724857 Gene

ncRNA

Quality Score for this RNA gene is

13

Aliases for LOC102724857 Gene

  • Uncharacterized LOC102724857 3

External Ids for LOC102724857 Gene

Previous GeneCards Identifiers for LOC102724857 Gene

  • GC01U904106
  • GC01P184539

Summaries for LOC102724857 Gene

GeneCards Summary for LOC102724857 Gene

LOC102724857 (Uncharacterized LOC102724857) is an RNA Gene, and is affiliated with the ncRNA class.

Additional gene information for LOC102724857 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for LOC102724857 Gene

Genomics for LOC102724857 Gene

GeneHancer (GH) Regulatory Elements for LOC102724857 Gene

Promoters and enhancers for LOC102724857 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH01J184534 Enhancer 0.9 Ensembl ENCODE dbSUPER 0.7 -3.3 -3278 2.7 SP1 PKNOX1 MNT CREB1 NR2F2 C1orf21 LOC102724857 GC01P184462
GH01J184544 Enhancer 0.7 Ensembl ENCODE 0.4 +6.8 6752 1.7 CTBP1 FOS ZNF217 SMARCE1 C1orf21 LOC102724857 LOC100129573
GH01J184490 Enhancer 1.1 ENCODE dbSUPER 0.3 -46.3 -46330 4.5 ZKSCAN8 ZNF148 ZNF687 BACH1 TFE3 SP1 CREM PRDM1 ZNF644 ZNF639 C1orf21 EDEM3 GC01P184462 LOC102724857
GH01J184555 Enhancer 0.7 Ensembl ENCODE 0.4 +17.9 17879 3.3 ZIC2 SCRT2 POLR2A ZFHX2 ZNF146 EGR2 C1orf21 TSEN15 LOC100129573 LOC102724857
GH01J184506 Enhancer 0.8 FANTOM5 Ensembl ENCODE dbSUPER 0.3 -31.4 -31380 2.8 C1orf21 EDEM3 LOC102724857 GC01P184462
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LOC102724857 on UCSC Golden Path with GeneCards custom track

Genomic Locations for LOC102724857 Gene

Genomic Locations for LOC102724857 Gene
chr1:184,538,781-184,542,649
(GRCh38/hg38)
Size:
3,869 bases
Orientation:
Plus strand

Genomic View for LOC102724857 Gene

Genes around LOC102724857 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC102724857 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC102724857 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC102724857 Gene

Proteins for LOC102724857 Gene

Post-translational modifications for LOC102724857 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC102724857 Gene

Domains & Families for LOC102724857 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for LOC102724857 Gene

Function for LOC102724857 Gene

Phenotypes From GWAS Catalog for LOC102724857 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC102724857 Gene

Localization for LOC102724857 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC102724857 Gene

Pathways & Interactions for LOC102724857 Gene

PathCards logo

SuperPathways for LOC102724857 Gene

No Data Available

Interacting Proteins for LOC102724857 Gene

Gene Ontology (GO) - Biological Process for LOC102724857 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for LOC102724857 Gene

Drugs & Compounds for LOC102724857 Gene

No Compound Related Data Available

Transcripts for LOC102724857 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for LOC102724857 Gene

No ASD Table

Relevant External Links for LOC102724857 Gene

GeneLoc Exon Structure for
LOC102724857

No data available for mRNA/cDNA for LOC102724857 Gene

Expression for LOC102724857 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC102724857 Gene

Orthologs for LOC102724857 Gene

No data available for Orthologs and Evolution for LOC102724857 Gene

Paralogs for LOC102724857 Gene

No data available for Paralogs for LOC102724857 Gene

Variants for LOC102724857 Gene

Sequence variations from dbSNP and Humsavar for LOC102724857 Gene

SNP ID Clin Chr 01 pos Variation AA Info Type
rs1000407649 -- 184,539,078(+) A/C non_coding_transcript_variant
rs1000581889 -- 184,538,562(+) T/C upstream_transcript_variant
rs1001419771 -- 184,542,404(+) A/C/G intron_variant, non_coding_transcript_variant
rs1001471740 -- 184,542,156(+) C/A non_coding_transcript_variant
rs1001904512 -- 184,541,659(+) G/A intron_variant

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC102724857 Gene

Disorders for LOC102724857 Gene

No disorders were found for LOC102724857 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC102724857 Gene

Publications for LOC102724857 Gene

No publications were found for LOC102724857 Gene.

No data available for External Links for LOC102724857 Gene

Products for LOC102724857 Gene

Sources for LOC102724857 Gene

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