Free for academic non-profit institutions. Other users need a Commercial license

Aliases for LOC102724851 Gene

Subcategory (RNA class) for LOC102724851 Gene

ncRNA

Quality Score for this RNA gene is

2

Aliases for LOC102724851 Gene

  • Uncharacterized LOC102724851 3
  • AL513548.1 5

External Ids for LOC102724851 Gene

Previous GeneCards Identifiers for LOC102724851 Gene

  • GC06U902560
  • GC06P026677
  • GC06P026679
  • GC06P026715
  • GC06P026742
  • GC06P026776
  • GC06P026843
  • GC06P026939

Summaries for LOC102724851 Gene

GeneCards Summary for LOC102724851 Gene

LOC102724851 (Uncharacterized LOC102724851) is an RNA Gene, and is affiliated with the ncRNA class.

Additional gene information for LOC102724851 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for LOC102724851 Gene

Genomics for LOC102724851 Gene

GeneHancer (GH) Regulatory Elements for LOC102724851 Gene

Promoters and enhancers for LOC102724851 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH06I027126 Promoter/Enhancer 2.6 EPDnew Ensembl ENCODE dbSUPER 35.7 +467.0 467049 23 CLOCK FEZF1 DMAP1 IRF4 YY1 ZNF213 E2F8 ZNF143 SP3 NFYC HIST1H2AH HIST1H2AG HIST1H4I GC06P027140 HIST1H2BJ HIST1H2BK ZKSCAN8 ABT1 HMGN4 BTN2A1
GH06I026534 Promoter/Enhancer 2.6 EPDnew Ensembl ENCODE dbSUPER 30.9 -133.9 -133899 5 MLX FEZF1 DMAP1 IRF4 YY1 ZNF213 E2F8 ZNF143 SP3 MEF2D HMGN4 PIR54163 TRR-ACG1-2 TRV-CAC1-6 LOC102724851 BTN3A2 ZNF391 BTN2A1 ZNF322 ENSG00000271755
GH06I026954 Promoter/Enhancer 1.5 Ensembl ENCODE 52.8 +285.3 285322 3 PKNOX1 ARNT ARID4B SIN3A DMAP1 ZNF2 POLR2B ZNF213 E2F8 ZNF143 LINC00240 GUSBP2 LOC102724851 BTN2A2 BTN3A2 ABT1 BTN2A1 HMGN4 BTN2A3P PIR32605
GH06I026283 Promoter/Enhancer 2.4 EPDnew Ensembl ENCODE dbSUPER 23.7 -385.9 -385866 3.8 CLOCK MLX ZFP64 FEZF1 DMAP1 IRF4 YY1 SLC30A9 ZNF213 E2F8 HIST1H4H PIR54542 PIR40221 LOC105374985 PIR50839 TRX-CAT1-2 ABT1 HMGN4 BTN2A3P BTN2A1
GH06I026520 Promoter/Enhancer 1.9 FANTOM5 Ensembl ENCODE 25.5 -149.2 -149212 3.4 CLOCK MLX DMAP1 IRF4 YY1 SLC30A9 ZNF213 E2F8 ZNF143 SP3 GC06P027047 HCG11 PIR62171 TRL-CAG1-7 GC06P027056 ZNF322 LOC102724851 HMGN4 BTN1A1 GUSBP2
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around LOC102724851 on UCSC Golden Path with GeneCards custom track

Genomic Locations for LOC102724851 Gene

Genomic Locations for LOC102724851 Gene
chr6:26,670,973-26,687,964
(GRCh38/hg38)
Size:
16,992 bases
Orientation:
Plus strand

Genomic View for LOC102724851 Gene

Genes around LOC102724851 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC102724851 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC102724851 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC102724851 Gene

Proteins for LOC102724851 Gene

Post-translational modifications for LOC102724851 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC102724851 Gene

Domains & Families for LOC102724851 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for LOC102724851 Gene

Function for LOC102724851 Gene

Phenotypes From GWAS Catalog for LOC102724851 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC102724851 Gene

Localization for LOC102724851 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC102724851 Gene

Pathways & Interactions for LOC102724851 Gene

SuperPathways for LOC102724851 Gene

No Data Available

Interacting Proteins for LOC102724851 Gene

Gene Ontology (GO) - Biological Process for LOC102724851 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for LOC102724851 Gene

Drugs & Compounds for LOC102724851 Gene

No Compound Related Data Available

Transcripts for LOC102724851 Gene

mRNA/cDNA for LOC102724851 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for LOC102724851 Gene

No ASD Table

Relevant External Links for LOC102724851 Gene

GeneLoc Exon Structure for
LOC102724851

Expression for LOC102724851 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for LOC102724851 Gene

genes like me logo Genes that share expression patterns with LOC102724851: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC102724851 Gene

Orthologs for LOC102724851 Gene

Evolution for LOC102724851 Gene

ENSEMBL:
Gene Tree for LOC102724851 (if available)
TreeFam:
Gene Tree for LOC102724851 (if available)

No data available for Orthologs for LOC102724851 Gene

Paralogs for LOC102724851 Gene

No data available for Paralogs for LOC102724851 Gene

Variants for LOC102724851 Gene

Sequence variations from dbSNP and Humsavar for LOC102724851 Gene

SNP ID Clin Chr 06 pos Variation AA Info Type
rs1045415 -- 26,687,685(+) G/A non_coding_transcript_variant
rs1045416 -- 26,687,707(+) A/G non_coding_transcript_variant
rs10456332 -- 26,685,903(+) A/C intron_variant, non_coding_transcript_variant
rs10456333 -- 26,687,313(+) G/A/C non_coding_transcript_variant
rs1052479 -- 26,672,597(+) T/G genic_upstream_transcript_variant, non_coding_transcript_variant

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC102724851 Gene

Disorders for LOC102724851 Gene

No disorders were found for LOC102724851 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC102724851 Gene

Publications for LOC102724851 Gene

No publications were found for LOC102724851 Gene.

Products for LOC102724851 Gene

Sources for LOC102724851 Gene

Content
Loading form....