Free for academic non-profit institutions. Other users need a Commercial license

Aliases for LOC102724817 Gene

Subcategory (RNA class) for LOC102724817 Gene

ncRNA

Quality Score for this RNA gene is

13

Aliases for LOC102724817 Gene

  • Uncharacterized LOC102724817 3

External Ids for LOC102724817 Gene

Previous GeneCards Identifiers for LOC102724817 Gene

  • GC03U902197

Summaries for LOC102724817 Gene

GeneCards Summary for LOC102724817 Gene

LOC102724817 (Uncharacterized LOC102724817) is an RNA Gene, and is affiliated with the ncRNA class.

Additional gene information for LOC102724817 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for LOC102724817 Gene

Genomics for LOC102724817 Gene

GeneHancer (GH) Regulatory Elements for LOC102724817 Gene

Promoters and enhancers for LOC102724817 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH03J072614 Enhancer 0.9 Ensembl ENCODE 600.7 +0.6 612 2.1 ZNF148 ZNF644 IKZF1 SP1 LEF1 HDAC1 NFE2 RUNX3 ARNT MEF2D LOC102724817 RNU1-62P RYBP LOC105377161 GC03P072575
GH03J072618 Enhancer 0.8 Ensembl ENCODE 0.7 +4.2 4173 3.2 HNF1A GATAD2A CTCF BCL6 POLR2A ATF1 HLF NR2F6 RNU1-62P RYBP LOC102724817 LOC105377161
GH03J072590 Enhancer 1.4 FANTOM5 Ensembl ENCODE 0.3 -22.7 -22660 2.3 ELF3 CBFA2T2 RERE AHR ZNF24 TFE3 SP7 SP1 HNF1A PPARG RYBP ENSG00000239568 GC03P072575 LOC102724817 LOC105377161
GH03J072624 Enhancer 1.1 Ensembl ENCODE 0.4 +14.0 13973 7.6 CEBPG NFIB NCOA3 MAFK ZNF644 SMARCA4 IKZF1 IKZF2 ZNF512 TARDBP RYBP LOC102724817 LOC105377161
GH03J072638 Enhancer 0.7 Ensembl 0.3 +25.4 25373 1.6 ZNF680 ZBTB8A PRDM12 ZNF140 ZNF266 ZNF623 ZBTB11 ZNF213 ZC3H11A ZNF202 SHQ1 EBLN2 RYBP LOC105377161 LOC102724817
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LOC102724817 on UCSC Golden Path with GeneCards custom track

Genomic Locations for LOC102724817 Gene

Genomic Locations for LOC102724817 Gene
chr3:72,614,228-72,616,367
(GRCh38/hg38)
Size:
2,140 bases
Orientation:
Plus strand

Genomic View for LOC102724817 Gene

Genes around LOC102724817 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC102724817 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC102724817 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC102724817 Gene

Proteins for LOC102724817 Gene

Post-translational modifications for LOC102724817 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC102724817 Gene

Domains & Families for LOC102724817 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for LOC102724817 Gene

Function for LOC102724817 Gene

Phenotypes From GWAS Catalog for LOC102724817 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC102724817 Gene

Localization for LOC102724817 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC102724817 Gene

Pathways & Interactions for LOC102724817 Gene

PathCards logo

SuperPathways for LOC102724817 Gene

No Data Available

Interacting Proteins for LOC102724817 Gene

Gene Ontology (GO) - Biological Process for LOC102724817 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for LOC102724817 Gene

Drugs & Compounds for LOC102724817 Gene

No Compound Related Data Available

Transcripts for LOC102724817 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for LOC102724817 Gene

No ASD Table

Relevant External Links for LOC102724817 Gene

GeneLoc Exon Structure for
LOC102724817

No data available for mRNA/cDNA for LOC102724817 Gene

Expression for LOC102724817 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC102724817 Gene

Orthologs for LOC102724817 Gene

No data available for Orthologs and Evolution for LOC102724817 Gene

Paralogs for LOC102724817 Gene

No data available for Paralogs for LOC102724817 Gene

Variants for LOC102724817 Gene

Sequence variations from dbSNP and Humsavar for LOC102724817 Gene

SNP ID Clin Chr 03 pos Variation AA Info Type
rs1000410093 -- 72,613,420(+) G/C upstream_transcript_variant
rs1000738682 -- 72,613,102(+) G/A upstream_transcript_variant
rs1001145391 -- 72,612,144(+) T/C upstream_transcript_variant
rs1001952671 -- 72,614,124(+) C/A/T upstream_transcript_variant
rs1002045976 -- 72,614,446(+) C/A intron_variant

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC102724817 Gene

Disorders for LOC102724817 Gene

No disorders were found for LOC102724817 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC102724817 Gene

Publications for LOC102724817 Gene

No publications were found for LOC102724817 Gene.

No data available for External Links for LOC102724817 Gene

Products for LOC102724817 Gene

Sources for LOC102724817 Gene

Content
Loading form....