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Aliases for LOC102724814 Gene

Subcategory (RNA class) for LOC102724814 Gene

ncRNA

Quality Score for this RNA gene is

13

Aliases for LOC102724814 Gene

  • Uncharacterized LOC102724814 3
  • Novel Transcript, Antisense To AP1G2 5
  • AL135999.1 5

External Ids for LOC102724814 Gene

Summaries for LOC102724814 Gene

GeneCards Summary for LOC102724814 Gene

LOC102724814 (Uncharacterized LOC102724814) is an RNA Gene, and is affiliated with the ncRNA class.

Additional gene information for LOC102724814 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for LOC102724814 Gene

Genomics for LOC102724814 Gene

GeneHancer (GH) Regulatory Elements for LOC102724814 Gene

Promoters and enhancers for LOC102724814 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH14J022976 Promoter/Enhancer 2.7 EPDnew FANTOM5 Ensembl ENCODE dbSUPER 58.5 -581.1 -581146 7.7 ZNF652 SP1 CC2D1A ELF3 CTCF MNT CBFA2T2 ZNF148 NKRF POLR2A AJUBA ACIN1 NGDN PRMT5 RBM23 HAUS4 C14orf93 PABPN1 LOC102724814 MMP14
GH14J022927 Promoter/Enhancer 2.3 EPDnew Ensembl ENCODE dbSUPER 35.3 -631.6 -631585 3.4 MTA3 ZNF652 CC2D1A SP1 ELF3 CTCF MNT NKRF POLR2A MLLT1 PRMT5 LOC101926933 ENSG00000257285 TRR-ACG1-3 NGDN ACIN1 HAUS4 RBM23 SLC7A8 LOC102724814
GH14J024187 Promoter/Enhancer 2.3 EPDnew Ensembl ENCODE dbSUPER 33.7 +627.2 627213 2.6 ZNF652 SP1 ZFX ELF3 MNT SIX5 ZNF148 NKRF POLR2A MLLT1 IPO4 NGDN RNF31 RNA5SP383 KHNYN ENSG00000259321 LOC102724814 SDR39U1 NFATC4 SLC22A17
GH14J023067 Promoter/Enhancer 2.3 EPDnew Ensembl ENCODE dbSUPER 25.8 -490.6 -490635 5.9 ZNF652 SP1 ZFX ELF3 CTCF ZNF148 POLR2A MLLT1 CEBPG GTF2F1 ACIN1 C14orf93 NGDN LOC102724814 RBM23 HAUS4 PRMT5 PSMB11 PSMB5 C14orf119
GH14J023297 Promoter/Enhancer 2.3 EPDnew Ensembl ENCODE dbSUPER 21.8 -260.1 -260116 6 ZNF652 ELF3 ZFX CTCF MNT CBFA2T2 ZNF148 NKRF POLR2A MLLT1 HOMEZ PPP1R3E PIR57322 NGDN ACIN1 RNA5SP383 RNF31 PRMT5 RBM23 LOC102724814
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LOC102724814 on UCSC Golden Path with GeneCards custom track

Genomic Locations for LOC102724814 Gene

Genomic Locations for LOC102724814 Gene
chr14:23,561,097-23,568,076
(GRCh38/hg38)
Size:
6,980 bases
Orientation:
Plus strand
chr14:24,030,306-24,037,282
(GRCh37/hg19)
Size:
6,977 bases
Orientation:
Plus strand

Genomic View for LOC102724814 Gene

Genes around LOC102724814 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC102724814 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC102724814 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC102724814 Gene

Proteins for LOC102724814 Gene

Post-translational modifications for LOC102724814 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC102724814 Gene

Domains & Families for LOC102724814 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for LOC102724814 Gene

Function for LOC102724814 Gene

Phenotypes From GWAS Catalog for LOC102724814 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC102724814 Gene

Localization for LOC102724814 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC102724814 Gene

Pathways & Interactions for LOC102724814 Gene

PathCards logo

SuperPathways for LOC102724814 Gene

No Data Available

Interacting Proteins for LOC102724814 Gene

Gene Ontology (GO) - Biological Process for LOC102724814 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for LOC102724814 Gene

Drugs & Compounds for LOC102724814 Gene

No Compound Related Data Available

Transcripts for LOC102724814 Gene

mRNA/cDNA for LOC102724814 Gene

(2) Additional mRNA sequences :
(1) Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :
(2) RNA Central transcripts :

Alternative Splicing Database (ASD) splice patterns (SP) for LOC102724814 Gene

No ASD Table

Relevant External Links for LOC102724814 Gene

GeneLoc Exon Structure for
LOC102724814

Expression for LOC102724814 Gene

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC102724814 Gene

Orthologs for LOC102724814 Gene

Evolution for LOC102724814 Gene

ENSEMBL:
Gene Tree for LOC102724814 (if available)
TreeFam:
Gene Tree for LOC102724814 (if available)

No data available for Orthologs for LOC102724814 Gene

Paralogs for LOC102724814 Gene

No data available for Paralogs for LOC102724814 Gene

Variants for LOC102724814 Gene

Sequence variations from dbSNP and Humsavar for LOC102724814 Gene

SNP ID Clin Chr 14 pos Variation AA Info Type
rs1000020209 -- 23,562,724(+) G/A intron_variant
rs1000021465 -- 23,563,336(+) G/T intron_variant
rs1000478010 -- 23,562,893(+) C/T intron_variant
rs1001432768 -- 23,563,269(+) T/G intron_variant
rs1002910558 -- 23,564,245(+) G/A/C intron_variant

Structural Variations from Database of Genomic Variants (DGV) for LOC102724814 Gene

Variant ID Type Subtype PubMed ID
nsv564044 CNV loss 21841781
nsv952817 CNV deletion 24416366

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Variation tolerance and Additional Variant Information for LOC102724814 Gene

Disorders for LOC102724814 Gene

No disorders were found for LOC102724814 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC102724814 Gene

Publications for LOC102724814 Gene

  1. GWAS for discovery and replication of genetic loci associated with sudden cardiac arrest in patients with coronary artery disease. (PMID: 21658281) Aouizerat BE … Tseng ZH (BMC cardiovascular disorders 2011) 3 58
  2. Complete sequencing and characterization of 21,243 full-length human cDNAs. (PMID: 14702039) Ota T … Sugano S (Nature genetics 2004) 3 58
  3. Normalization and subtraction: two approaches to facilitate gene discovery. (PMID: 8889548) Bonaldo MF … Soares MB (Genome research 1996) 3 58

No data available for External Links for LOC102724814 Gene

Products for LOC102724814 Gene

Sources for LOC102724814 Gene

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