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Aliases for LOC102724805 Gene

Subcategory (RNA class) for LOC102724805 Gene

ncRNA

Quality Score for this RNA gene is

13

Aliases for LOC102724805 Gene

  • Uncharacterized LOC102724805 3

External Ids for LOC102724805 Gene

Previous GeneCards Identifiers for LOC102724805 Gene

  • GC02U903011

Summaries for LOC102724805 Gene

GeneCards Summary for LOC102724805 Gene

LOC102724805 (Uncharacterized LOC102724805) is an RNA Gene, and is affiliated with the ncRNA class.

Additional gene information for LOC102724805 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for LOC102724805 Gene

Genomics for LOC102724805 Gene

GeneHancer (GH) Regulatory Elements for LOC102724805 Gene

Promoters and enhancers for LOC102724805 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH02J088690 Promoter/Enhancer 2.1 EPDnew Ensembl ENCODE 600.7 -0.2 -207 3 SP1 ZFX ELF3 CTCF MNT SIX5 ZNF148 NKRF POLR2A CEBPG RPIA LOC102724805 ANKRD36BP2 TEX37 EIF2AK3 LOC105374853
GH02J088656 Enhancer 1.1 FANTOM5 ENCODE 0.3 +32.7 32737 4.6 SP1 ZKSCAN8 ZNF148 ZNF24 TFE3 PPARG SP5 ZNF639 CREB1 PKNOX1 LOC101928371 ANKRD36BP2 IGKV1-13 GC02M088650 LOC102724805
GH02J088670 Enhancer 0.9 Ensembl ENCODE 0.3 +21.7 21675 0.4 CC2D1A CTCF ZNF644 RAD21 REST TRIM22 FOXA2 SCRT2 RUNX3 JUND GC02M088650 LOC102724805
GH02J088671 Enhancer 0.7 Ensembl 0.4 +19.5 19475 0.4 CTCF ZNF384 RAD21 CREB1 ZNF143 REST TRIM22 ARNT ZBTB44 SMARCA5 LOC102724805 GC02M088650
GH02J088680 Enhancer 0.6 ENCODE 0.4 +11.0 11018 0.2 PPARG CEBPA GATAD2A RXRB SOX13 NFIC HNF4A NFIA RARA NR2F6 LOC102724805 GC02M088650
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LOC102724805 on UCSC Golden Path with GeneCards custom track

Genomic Locations for LOC102724805 Gene

Genomic Locations for LOC102724805 Gene
chr2:88,634,296-88,691,476
(GRCh38/hg38)
Size:
57,181 bases
Orientation:
Minus strand

Genomic View for LOC102724805 Gene

Genes around LOC102724805 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC102724805 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC102724805 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC102724805 Gene

Proteins for LOC102724805 Gene

Post-translational modifications for LOC102724805 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC102724805 Gene

Domains & Families for LOC102724805 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for LOC102724805 Gene

Function for LOC102724805 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC102724805 Gene

Localization for LOC102724805 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC102724805 Gene

Pathways & Interactions for LOC102724805 Gene

PathCards logo

SuperPathways for LOC102724805 Gene

No Data Available

Interacting Proteins for LOC102724805 Gene

Gene Ontology (GO) - Biological Process for LOC102724805 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for LOC102724805 Gene

Drugs & Compounds for LOC102724805 Gene

No Compound Related Data Available

Transcripts for LOC102724805 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for LOC102724805 Gene

No ASD Table

Relevant External Links for LOC102724805 Gene

GeneLoc Exon Structure for
LOC102724805

No data available for mRNA/cDNA for LOC102724805 Gene

Expression for LOC102724805 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC102724805 Gene

Orthologs for LOC102724805 Gene

No data available for Orthologs and Evolution for LOC102724805 Gene

Paralogs for LOC102724805 Gene

No data available for Paralogs for LOC102724805 Gene

Variants for LOC102724805 Gene

Sequence variations from dbSNP and Humsavar for LOC102724805 Gene

SNP ID Clin Chr 02 pos Variation AA Info Type
rs372920523 uncertain-significance, Deficiency of ribose-5-phosphate isomerase 88,691,916(-) C/G upstream_transcript_variant
rs756750653 uncertain-significance, Deficiency of ribose-5-phosphate isomerase 88,691,753(-) C/A upstream_transcript_variant
rs1000232558 -- 88,659,586(-) A/G genic_downstream_transcript_variant, intron_variant
rs1000286341 -- 88,659,371(-) G/A genic_downstream_transcript_variant, intron_variant
rs1000332466 -- 88,658,255(-) T/C genic_downstream_transcript_variant, intron_variant

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC102724805 Gene

Disorders for LOC102724805 Gene

No disorders were found for LOC102724805 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC102724805 Gene

Publications for LOC102724805 Gene

No publications were found for LOC102724805 Gene.

No data available for External Links for LOC102724805 Gene

Products for LOC102724805 Gene

Sources for LOC102724805 Gene

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