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Aliases for LOC102724804 Gene

Subcategory (RNA class) for LOC102724804 Gene

ncRNA

Quality Score for this RNA gene is

13

Aliases for LOC102724804 Gene

  • Uncharacterized LOC102724804 3

External Ids for LOC102724804 Gene

Previous GeneCards Identifiers for LOC102724804 Gene

  • GC08U901899

Summaries for LOC102724804 Gene

GeneCards Summary for LOC102724804 Gene

LOC102724804 (Uncharacterized LOC102724804) is an RNA Gene, and is affiliated with the ncRNA class.

Additional gene information for LOC102724804 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for LOC102724804 Gene

Genomics for LOC102724804 Gene

GeneHancer (GH) Regulatory Elements for LOC102724804 Gene

Promoters and enhancers for LOC102724804 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH08J096386 Promoter/Enhancer 0.7 Ensembl ENCODE 600.7 +0.5 476 1.4 ENSG00000253105 LOC102724804 GC08M096377
GH08J096375 Enhancer 1.1 Ensembl ENCODE 0.4 +11.2 11180 1.7 ELF3 CEBPG RERE TFE3 SP1 HNF1A PPARG ZNF384 ZNF644 KAT8 GC08M096377 ENSG00000253105 LOC102724804 GC08P096341
GH08J096377 Enhancer 0.9 Ensembl ENCODE 0.4 +9.4 9437 0.4 SP1 RXRA CEBPA GATAD2A ATF7 FOXA2 MNT JUND ATF2 ATF3 GC08M096377 ENSG00000253105 LOC102724804 GC08P096341
GH08J096401 Enhancer 0.5 Ensembl ENCODE 0.4 -14.4 -14363 1.2 JUND ENSG00000253105 LOC102724804 LOC105375653
GH08J096380 Enhancer 0.4 Ensembl 0.4 +6.5 6537 1 ZNF24 ZFHX2 EGR2 GC08M096377 ENSG00000253105 LOC102724804
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LOC102724804 on UCSC Golden Path with GeneCards custom track

Genomic Locations for LOC102724804 Gene

Genomic Locations for LOC102724804 Gene
chr8:96,371,926-96,387,438
(GRCh38/hg38)
Size:
15,513 bases
Orientation:
Minus strand

Genomic View for LOC102724804 Gene

Genes around LOC102724804 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC102724804 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC102724804 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC102724804 Gene

Proteins for LOC102724804 Gene

Post-translational modifications for LOC102724804 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC102724804 Gene

Domains & Families for LOC102724804 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for LOC102724804 Gene

Function for LOC102724804 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC102724804 Gene

Localization for LOC102724804 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC102724804 Gene

Pathways & Interactions for LOC102724804 Gene

PathCards logo

SuperPathways for LOC102724804 Gene

No Data Available

Interacting Proteins for LOC102724804 Gene

Gene Ontology (GO) - Biological Process for LOC102724804 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for LOC102724804 Gene

Drugs & Compounds for LOC102724804 Gene

No Compound Related Data Available

Transcripts for LOC102724804 Gene

mRNA/cDNA for LOC102724804 Gene

(3) Additional mRNA sequences :
(2) RNA Central transcripts :

Alternative Splicing Database (ASD) splice patterns (SP) for LOC102724804 Gene

No ASD Table

Relevant External Links for LOC102724804 Gene

GeneLoc Exon Structure for
LOC102724804

Expression for LOC102724804 Gene

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC102724804 Gene

Orthologs for LOC102724804 Gene

No data available for Orthologs and Evolution for LOC102724804 Gene

Paralogs for LOC102724804 Gene

No data available for Paralogs for LOC102724804 Gene

Variants for LOC102724804 Gene

Sequence variations from dbSNP and Humsavar for LOC102724804 Gene

SNP ID Clin Chr 08 pos Variation AA Info Type
rs1000004870 -- 96,376,537(-) C/T intron_variant
rs1000166892 -- 96,377,255(-) G/A/T intron_variant
rs1000169833 -- 96,385,822(-) A/G intron_variant
rs1000240944 -- 96,383,126(-) A/T intron_variant
rs1000503448 -- 96,378,729(-) C/A intron_variant

Structural Variations from Database of Genomic Variants (DGV) for LOC102724804 Gene

Variant ID Type Subtype PubMed ID
esv3572913 CNV loss 25503493
nsv526171 CNV gain 19592680

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Variation tolerance and Additional Variant Information for LOC102724804 Gene

Disorders for LOC102724804 Gene

No disorders were found for LOC102724804 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC102724804 Gene

Publications for LOC102724804 Gene

  1. Diversification of transcriptional modulation: large-scale identification and characterization of putative alternative promoters of human genes. (PMID: 16344560) Kimura K … Sugano S (Genome research 2006) 3 58

No data available for External Links for LOC102724804 Gene

Products for LOC102724804 Gene

Sources for LOC102724804 Gene

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