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Aliases for LOC102724800 Gene

Subcategory (RNA class) for LOC102724800 Gene


Quality Score for this RNA gene is


Aliases for LOC102724800 Gene

  • Uncharacterized LOC102724800 3

External Ids for LOC102724800 Gene

Previous GeneCards Identifiers for LOC102724800 Gene

  • GC21U900591

Summaries for LOC102724800 Gene

GeneCards Summary for LOC102724800 Gene

LOC102724800 (Uncharacterized LOC102724800) is an RNA Gene, and is affiliated with the ncRNA class. Diseases associated with LOC102724800 include Popliteal Pterygium Syndrome.

Additional gene information for LOC102724800 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for LOC102724800 Gene

Genomics for LOC102724800 Gene

GeneHancer (GH) Regulatory Elements for LOC102724800 Gene

Promoters and enhancers for LOC102724800 Gene
GeneHancer (GH) Identifier GH Type GH
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH21J041760 Promoter/Enhancer 2.5 EPDnew FANTOM5 Ensembl ENCODE dbSUPER 600.7 -1.2 -1243 10.8 ZNF652 SP1 ELF3 POLR2A CEBPG RERE ZSCAN21 AHR TFE3 SP7 RIPK4 LOC102724800 LINC00479 PRDM15 ENSG00000236883 LINC00112 MX2 ZBTB21 MX1 ABCG1
GH21J041776 Promoter/Enhancer 1.5 Ensembl ENCODE dbSUPER 0.4 +11.3 11294 3.9 CTCF SP7 SP1 ZNF680 RNF2 ZBTB8A YBX1 ZNF600 ZNF512 ZIC2 PRDM15 ZBTB21 ENSG00000227698 LINC00479 LOC102724800 GC21M041838
GH21J041782 Enhancer 1.2 ENCODE dbSUPER 0.4 +16.5 16466 1.7 CBFA2T2 ZNF121 ZNF384 NFIB ZSCAN21 NCOA3 MYC SP7 KLF14 MZF1 PRDM15 ENSG00000233754 ENSG00000227698 LINC00479 LINC00112 TFF3 LOC102724800 GC21M041838
GH21J041785 Enhancer 0.9 ENCODE dbSUPER 0.4 +19.5 19457 2.3 ZNF652 PPARG FOSL2 PKNOX1 SMARCC1 CEBPB JUN JUND BMI1 EP300 LINC00112 LINC00479 PRDM15 LOC102724800 GC21M041838
GH21J041835 Enhancer 0.8 Ensembl ENCODE 0.2 +69.1 69107 1 ZNF148 EP300 MGA ZNF766 NFRKB ZFHX2 VEZF1 ZBTB33 EGR2 L3MBTL2 PRDM15 GC21M041838 LOC102724800
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LOC102724800 on UCSC Golden Path with GeneCards custom track

Genomic Locations for LOC102724800 Gene

Genomic Locations for LOC102724800 Gene
7,679 bases
Plus strand

Genomic View for LOC102724800 Gene

Genes around LOC102724800 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC102724800 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC102724800 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC102724800 Gene

Proteins for LOC102724800 Gene

Post-translational modifications for LOC102724800 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC102724800 Gene

Domains & Families for LOC102724800 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for LOC102724800 Gene

Function for LOC102724800 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC102724800 Gene

Localization for LOC102724800 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC102724800 Gene

Pathways & Interactions for LOC102724800 Gene

PathCards logo

SuperPathways for LOC102724800 Gene

No Data Available

Interacting Proteins for LOC102724800 Gene

Gene Ontology (GO) - Biological Process for LOC102724800 Gene


No data available for Pathways by source and SIGNOR curated interactions for LOC102724800 Gene

Drugs & Compounds for LOC102724800 Gene

No Compound Related Data Available

Transcripts for LOC102724800 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for LOC102724800 Gene

No ASD Table

Relevant External Links for LOC102724800 Gene

GeneLoc Exon Structure for

No data available for mRNA/cDNA for LOC102724800 Gene

Expression for LOC102724800 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC102724800 Gene

Orthologs for LOC102724800 Gene

No data available for Orthologs and Evolution for LOC102724800 Gene

Paralogs for LOC102724800 Gene

No data available for Paralogs for LOC102724800 Gene

Variants for LOC102724800 Gene

Sequence variations from dbSNP and Humsavar for LOC102724800 Gene

SNP ID Clin Chr 21 pos Variation AA Info Type
rs199825512 likely-benign, Popliteal pterygium syndrome 41,767,035(+) C/T upstream_transcript_variant
rs6586238 likely-benign, Popliteal pterygium syndrome 41,766,883(+) C/A/G/T upstream_transcript_variant
rs6586239 likely-benign, Popliteal pterygium syndrome 41,767,007(+) G/A/C upstream_transcript_variant
rs774016517 uncertain-significance, Popliteal pterygium syndrome 41,767,085(+) G/C upstream_transcript_variant
rs1000227236 -- 41,771,860(+) C/T intron_variant

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC102724800 Gene

Disorders for LOC102724800 Gene

MalaCards: The human disease database

(1) MalaCards diseases for LOC102724800 Gene - From: GeneCards

Disorder Aliases PubMed IDs
popliteal pterygium syndrome
  • pps
- elite association - COSMIC cancer census association via MalaCards
genes like me logo Genes that share disorders with LOC102724800: view

No data available for UniProtKB/Swiss-Prot , Genatlas and External Links for LOC102724800 Gene

Publications for LOC102724800 Gene

No publications were found for LOC102724800 Gene.

No data available for External Links for LOC102724800 Gene

Products for LOC102724800 Gene

Sources for LOC102724800 Gene

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