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Aliases for LOC102724775 Gene

Subcategory (RNA class) for LOC102724775 Gene

ncRNA

Quality Score for this RNA gene is

13

Aliases for LOC102724775 Gene

  • Uncharacterized LOC102724775 3
  • CTD-2005H7.2 3

External Ids for LOC102724775 Gene

Previous GeneCards Identifiers for LOC102724775 Gene

  • GC11U902231
  • GC11P086727

Summaries for LOC102724775 Gene

GeneCards Summary for LOC102724775 Gene

LOC102724775 (Uncharacterized LOC102724775) is an RNA Gene, and is affiliated with the ncRNA class.

Additional gene information for LOC102724775 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for LOC102724775 Gene

Genomics for LOC102724775 Gene

GeneHancer (GH) Regulatory Elements for LOC102724775 Gene

Promoters and enhancers for LOC102724775 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH11J086761 Enhancer 0.7 Ensembl dbSUPER 600.7 -0.9 -859 0.8 POLR2A NFE2 MAFG EMSY LOC102724775 PRSS23 ENSG00000255250 GC11P086748
GH11J086774 Enhancer 1.2 Ensembl ENCODE dbSUPER 0.4 +13.1 13118 2.5 NCOA3 SP7 CREB1 CEBPG PRDM10 TARDBP ZEB2 CTBP1 TCF7L2 BRCA1 LOC100420680 ME3 HIKESHI ENSG00000279742 ENSG00000255471 ENSG00000255250 PRSS23 LOC102724775
GH11J086784 Enhancer 1.1 Ensembl ENCODE dbSUPER 0.3 +22.0 21960 2.4 ZEB2 CEBPB SCRT2 CHD2 JUN JUND USF1 SCRT1 EP300 RAD21 ME3 PRSS23 LOC102724775
GH11J086760 Enhancer 0.5 Ensembl dbSUPER 0.7 -2.5 -2459 0.4 JUND PRSS23 ENSG00000255250 LOC102724775 GC11P086748
GH11J086749 Enhancer 0.7 Ensembl dbSUPER 0.4 -13.2 -13159 1 ZNF148 MZF1 REST CTCF CTBP1 EHMT2 MLLT1 GC11P086748 PRSS23 ME3 ENSG00000255250 LOC102724775
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LOC102724775 on UCSC Golden Path with GeneCards custom track

Genomic Locations for LOC102724775 Gene

Genomic Locations for LOC102724775 Gene
chr11:86,763,060-86,765,464
(GRCh38/hg38)
Size:
2,405 bases
Orientation:
Plus strand

Genomic View for LOC102724775 Gene

Genes around LOC102724775 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC102724775 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC102724775 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC102724775 Gene

Proteins for LOC102724775 Gene

Post-translational modifications for LOC102724775 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC102724775 Gene

Domains & Families for LOC102724775 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for LOC102724775 Gene

Function for LOC102724775 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC102724775 Gene

Localization for LOC102724775 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC102724775 Gene

Pathways & Interactions for LOC102724775 Gene

PathCards logo

SuperPathways for LOC102724775 Gene

No Data Available

Interacting Proteins for LOC102724775 Gene

Gene Ontology (GO) - Biological Process for LOC102724775 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for LOC102724775 Gene

Drugs & Compounds for LOC102724775 Gene

No Compound Related Data Available

Transcripts for LOC102724775 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for LOC102724775 Gene

No ASD Table

Relevant External Links for LOC102724775 Gene

GeneLoc Exon Structure for
LOC102724775

No data available for mRNA/cDNA for LOC102724775 Gene

Expression for LOC102724775 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC102724775 Gene

Orthologs for LOC102724775 Gene

No data available for Orthologs and Evolution for LOC102724775 Gene

Paralogs for LOC102724775 Gene

No data available for Paralogs for LOC102724775 Gene

Variants for LOC102724775 Gene

Sequence variations from dbSNP and Humsavar for LOC102724775 Gene

SNP ID Clin Chr 11 pos Variation AA Info Type
rs1000331797 -- 86,765,630(+) C/A downstream_transcript_variant
rs1001322230 -- 86,759,581(+) CATACTCA/CA non_coding_transcript_variant
rs1001838999 -- 86,761,099(+) A/G non_coding_transcript_variant
rs1001870257 -- 86,761,530(+) T/C non_coding_transcript_variant
rs1002845592 -- 86,759,872(+) C/T non_coding_transcript_variant

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC102724775 Gene

Disorders for LOC102724775 Gene

No disorders were found for LOC102724775 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC102724775 Gene

Publications for LOC102724775 Gene

No publications were found for LOC102724775 Gene.

No data available for External Links for LOC102724775 Gene

Products for LOC102724775 Gene

Sources for LOC102724775 Gene

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