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Aliases for LOC102724754 Gene

Subcategory (RNA class) for LOC102724754 Gene

ncRNA

Quality Score for this RNA gene is

13

Aliases for LOC102724754 Gene

  • Uncharacterized LOC102724754 3

External Ids for LOC102724754 Gene

Previous GeneCards Identifiers for LOC102724754 Gene

  • GC01U904207

Summaries for LOC102724754 Gene

GeneCards Summary for LOC102724754 Gene

LOC102724754 (Uncharacterized LOC102724754) is an RNA Gene, and is affiliated with the ncRNA class.

Additional gene information for LOC102724754 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for LOC102724754 Gene

Genomics for LOC102724754 Gene

GeneHancer (GH) Regulatory Elements for LOC102724754 Gene

Promoters and enhancers for LOC102724754 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH01J178937 Enhancer 0.5 ENCODE dbSUPER 600.7 -0.4 -369 3.9 KLF9 LOC102724754 ANGPTL1 ENSG00000273062 RALGPS2 GC01P179007
GH01J178924 Enhancer 1.3 FANTOM5 Ensembl ENCODE dbSUPER 0.4 +8.3 8303 10.4 RELA CAVIN1 ZNF512 PKNOX1 SP1 USF1 JUNB NFIC NR2F2 BATF ANGPTL1 ENSG00000273062 RALGPS2 LOC102724754
GH01J178916 Enhancer 1.2 Ensembl ENCODE dbSUPER 0.3 +22.0 21966 1.2 ELF3 TFE3 HNF1A PPARG ZNF384 RXRA GATAD2A RXRB FOXK2 SOX13 ANGPTL1 LOC102724754 RALGPS2
GH01J178952 Enhancer 1 Ensembl ENCODE dbSUPER 0.4 -15.0 -14989 2.2 NCOA3 CREB1 ZNF7 CTBP1 KLF4 ZNF217 DPF2 ZNF687 MTA1 LOC102724754 GC01P179007
GH01J178918 Enhancer 1 ENCODE dbSUPER 0.4 +19.8 19848 1.5 ZNF652 ELF3 CEBPG RERE TFE3 HNF1A PPARG ZNF384 KAT8 HMG20B ENSG00000273062 ANGPTL1 LOC102724754 RALGPS2
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LOC102724754 on UCSC Golden Path with GeneCards custom track

Genomic Locations for LOC102724754 Gene

Genomic Locations for LOC102724754 Gene
chr1:178,936,757-178,938,904
(GRCh38/hg38)
Size:
2,148 bases
Orientation:
Minus strand

Genomic View for LOC102724754 Gene

Genes around LOC102724754 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC102724754 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC102724754 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC102724754 Gene

Proteins for LOC102724754 Gene

Post-translational modifications for LOC102724754 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC102724754 Gene

Domains & Families for LOC102724754 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for LOC102724754 Gene

Function for LOC102724754 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC102724754 Gene

Localization for LOC102724754 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC102724754 Gene

Pathways & Interactions for LOC102724754 Gene

PathCards logo

SuperPathways for LOC102724754 Gene

No Data Available

Interacting Proteins for LOC102724754 Gene

Gene Ontology (GO) - Biological Process for LOC102724754 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for LOC102724754 Gene

Drugs & Compounds for LOC102724754 Gene

No Compound Related Data Available

Transcripts for LOC102724754 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for LOC102724754 Gene

No ASD Table

Relevant External Links for LOC102724754 Gene

GeneLoc Exon Structure for
LOC102724754

No data available for mRNA/cDNA for LOC102724754 Gene

Expression for LOC102724754 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC102724754 Gene

Orthologs for LOC102724754 Gene

No data available for Orthologs and Evolution for LOC102724754 Gene

Paralogs for LOC102724754 Gene

No data available for Paralogs for LOC102724754 Gene

Variants for LOC102724754 Gene

Sequence variations from dbSNP and Humsavar for LOC102724754 Gene

SNP ID Clin Chr 01 pos Variation AA Info Type
rs1000054724 -- 178,935,227(-) G/T non_coding_transcript_variant
rs1000295778 -- 178,940,504(-) /G non_coding_transcript_variant
rs1000528308 -- 178,940,876(-) C/A/T upstream_transcript_variant
rs1000611308 -- 178,936,869(-) G/A/T non_coding_transcript_variant
rs1001353982 -- 178,941,694(-) T/G upstream_transcript_variant

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC102724754 Gene

Disorders for LOC102724754 Gene

No disorders were found for LOC102724754 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC102724754 Gene

Publications for LOC102724754 Gene

No publications were found for LOC102724754 Gene.

No data available for External Links for LOC102724754 Gene

Products for LOC102724754 Gene

Sources for LOC102724754 Gene

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