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Aliases for LOC102724748 Gene

Subcategory (RNA class) for LOC102724748 Gene

ncRNA

Quality Score for this RNA gene is

13

Aliases for LOC102724748 Gene

  • Uncharacterized LOC102724748 3

External Ids for LOC102724748 Gene

Previous GeneCards Identifiers for LOC102724748 Gene

  • GC05U901918

Summaries for LOC102724748 Gene

GeneCards Summary for LOC102724748 Gene

LOC102724748 (Uncharacterized LOC102724748) is an RNA Gene, and is affiliated with the ncRNA class.

Additional gene information for LOC102724748 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for LOC102724748 Gene

Genomics for LOC102724748 Gene

GeneHancer (GH) Regulatory Elements for LOC102724748 Gene

Promoters and enhancers for LOC102724748 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH05J096776 Enhancer 0.6 ENCODE 600.7 +0.2 234 0 ZNF629 ZNF524 OSR2 BCL11A FEZF1 KLF10 ZNF843 PRDM6 ZBTB21 ZNF362 GC05P096777 LOC102724748 ERAP1 CAST
GH05J096779 Enhancer 1.3 Ensembl ENCODE dbSUPER 0.7 +5.0 4978 3.4 ZNF121 ZNF384 ZBTB7A SP7 ZBTB8A PRDM10 ZSCAN4 ZEB2 ZNF639 ZNF629 ERAP1 ENSG00000248734 GC05P096777 LOC102724748
GH05J096785 Enhancer 0.7 dbSUPER 0.4 +9.7 9679 1.4 MZF1 PKNOX1 ZNF639 ZNF561 SCRT2 ZBTB44 ZBTB20 ZSCAN5C OSR2 WT1 ENSG00000248734 ERAP1 ERAP2 LOC102724748 ENSG00000272109
GH05J096762 Enhancer 0.4 dbSUPER 0.4 -12.0 -12029 3.3 ZNF384 POLR2A CEBPG ERAP1 ENSG00000248734 LIX1 LOC105379094 LOC102724748 CAST
GH05J096753 Enhancer 0.5 dbSUPER 0.3 -22.6 -22552 2.1 ZNF121 POLR2A CTCF RCOR1 LOC105379094 ERAP1 ENSG00000248734 LIX1 LOC102724748 CAST
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LOC102724748 on UCSC Golden Path with GeneCards custom track

Genomic Locations for LOC102724748 Gene

Genomic Locations for LOC102724748 Gene
chr5:96,776,558-96,785,791
(GRCh38/hg38)
Size:
9,234 bases
Orientation:
Plus strand

Genomic View for LOC102724748 Gene

Genes around LOC102724748 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC102724748 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC102724748 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC102724748 Gene

Proteins for LOC102724748 Gene

Post-translational modifications for LOC102724748 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC102724748 Gene

Domains & Families for LOC102724748 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for LOC102724748 Gene

Function for LOC102724748 Gene

Phenotypes From GWAS Catalog for LOC102724748 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC102724748 Gene

Localization for LOC102724748 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC102724748 Gene

Pathways & Interactions for LOC102724748 Gene

PathCards logo

SuperPathways for LOC102724748 Gene

No Data Available

Interacting Proteins for LOC102724748 Gene

Gene Ontology (GO) - Biological Process for LOC102724748 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for LOC102724748 Gene

Drugs & Compounds for LOC102724748 Gene

No Compound Related Data Available

Transcripts for LOC102724748 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for LOC102724748 Gene

No ASD Table

Relevant External Links for LOC102724748 Gene

GeneLoc Exon Structure for
LOC102724748

No data available for mRNA/cDNA for LOC102724748 Gene

Expression for LOC102724748 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC102724748 Gene

Orthologs for LOC102724748 Gene

No data available for Orthologs and Evolution for LOC102724748 Gene

Paralogs for LOC102724748 Gene

No data available for Paralogs for LOC102724748 Gene

Variants for LOC102724748 Gene

Sequence variations from dbSNP and Humsavar for LOC102724748 Gene

SNP ID Clin Chr 05 pos Variation AA Info Type
rs1000203516 -- 96,778,723(+) T/A intron_variant
rs1000211397 -- 96,778,451(+) G/A intron_variant
rs1000317415 -- 96,778,960(+) C/A intron_variant
rs1001026188 -- 96,776,921(+) T/G non_coding_transcript_variant
rs1001561529 -- 96,779,484(+) G/T intron_variant, non_coding_transcript_variant

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC102724748 Gene

Disorders for LOC102724748 Gene

No disorders were found for LOC102724748 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC102724748 Gene

Publications for LOC102724748 Gene

  1. Genome-wide association analysis identifies new susceptibility loci for Behçet's disease and epistasis between HLA-B*51 and ERAP1. (PMID: 23291587) Kirino Y … Kastner DL (Nature genetics 2013) 3 58

No data available for External Links for LOC102724748 Gene

Products for LOC102724748 Gene

Sources for LOC102724748 Gene

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