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Aliases for LOC102724745 Gene

Subcategory (RNA class) for LOC102724745 Gene

ncRNA

Quality Score for this RNA gene is

13

Aliases for LOC102724745 Gene

  • Uncharacterized LOC102724745 3

External Ids for LOC102724745 Gene

Previous GeneCards Identifiers for LOC102724745 Gene

  • GC18U900851

Summaries for LOC102724745 Gene

GeneCards Summary for LOC102724745 Gene

LOC102724745 (Uncharacterized LOC102724745) is an RNA Gene, and is affiliated with the ncRNA class.

Additional gene information for LOC102724745 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for LOC102724745 Gene

Genomics for LOC102724745 Gene

GeneHancer (GH) Regulatory Elements for LOC102724745 Gene

Promoters and enhancers for LOC102724745 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH18J058657 Promoter/Enhancer 2.2 EPDnew FANTOM5 Ensembl ENCODE dbSUPER 600.7 +0.6 562 4.2 SP1 CREM MLLT1 ZBED1 IKZF1 IKZF2 POLR2A PKNOX1 ZSCAN29 EED MALT1 ENSG00000275418 LOC102724745 SNORA108
GH18J058667 Promoter/Enhancer 2.4 EPDnew FANTOM5 Ensembl ENCODE dbSUPER 0.4 +12.0 11992 6.4 SP1 ELF3 NKRF CEBPG POLR2A ZNF687 ZSCAN21 AHR SP7 PPARG MALT1 LOC101927322 SNORA108 ENSG00000275418 LOC102724745 ENSG00000267476 LOC105372146
GH18J058662 Promoter/Enhancer 1.2 Ensembl dbSUPER 0.7 +3.8 3813 0.4 JUND RELA CREM ZBED1 IKZF1 IKZF2 ZSCAN29 DPF2 EED RUNX3 SNORA108 LOC102724745 ENSG00000275418 MALT1
GH18J058649 Enhancer 1.2 FANTOM5 ENCODE dbSUPER 0.4 -8.1 -8050 1.6 RELA CREM ZBED1 IKZF1 IKZF2 TRIM22 PKNOX1 CBFB DPF2 EED MALT1 LOC102724745 GC18P058645
GH18J058653 Enhancer 0.9 FANTOM5 dbSUPER 0.4 -5.1 -5115 0.2 ZNF687 MLLT1 IKZF1 BACH1 IKZF2 RELA TRIM22 ZNF592 NBN ZBTB33 MALT1 LOC102724745 GC18P058645
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LOC102724745 on UCSC Golden Path with GeneCards custom track

Genomic Locations for LOC102724745 Gene

Genomic Locations for LOC102724745 Gene
chr18:58,658,588-58,669,329
(GRCh38/hg38)
Size:
10,742 bases
Orientation:
Plus strand

Genomic View for LOC102724745 Gene

Genes around LOC102724745 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC102724745 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC102724745 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC102724745 Gene

Proteins for LOC102724745 Gene

Post-translational modifications for LOC102724745 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC102724745 Gene

Domains & Families for LOC102724745 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for LOC102724745 Gene

Function for LOC102724745 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC102724745 Gene

Localization for LOC102724745 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC102724745 Gene

Pathways & Interactions for LOC102724745 Gene

PathCards logo

SuperPathways for LOC102724745 Gene

No Data Available

Interacting Proteins for LOC102724745 Gene

Gene Ontology (GO) - Biological Process for LOC102724745 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for LOC102724745 Gene

Drugs & Compounds for LOC102724745 Gene

No Compound Related Data Available

Transcripts for LOC102724745 Gene

mRNA/cDNA for LOC102724745 Gene

(1) Additional mRNA sequences :

Alternative Splicing Database (ASD) splice patterns (SP) for LOC102724745 Gene

No ASD Table

Relevant External Links for LOC102724745 Gene

GeneLoc Exon Structure for
LOC102724745

Expression for LOC102724745 Gene

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC102724745 Gene

Orthologs for LOC102724745 Gene

No data available for Orthologs and Evolution for LOC102724745 Gene

Paralogs for LOC102724745 Gene

No data available for Paralogs for LOC102724745 Gene

Variants for LOC102724745 Gene

Sequence variations from dbSNP and Humsavar for LOC102724745 Gene

SNP ID Clin Chr 18 pos Variation AA Info Type
rs1000322291 -- 58,663,901(+) G/A genic_downstream_transcript_variant, intron_variant
rs1000504182 -- 58,668,303(+) T/C downstream_transcript_variant, genic_downstream_transcript_variant, intron_variant
rs1000920576 -- 58,660,194(+) CTCTCT/CT intron_variant
rs1000926858 -- 58,658,081(+) C/T upstream_transcript_variant
rs1001105239 -- 58,666,579(+) T/G genic_downstream_transcript_variant, intron_variant

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC102724745 Gene

Disorders for LOC102724745 Gene

No disorders were found for LOC102724745 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC102724745 Gene

Publications for LOC102724745 Gene

  1. Initial assessment of human gene diversity and expression patterns based upon 83 million nucleotides of cDNA sequence. (PMID: 7566098) Adams MD … White O (Nature 1995) 3 58

No data available for External Links for LOC102724745 Gene

Products for LOC102724745 Gene

Sources for LOC102724745 Gene

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