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Aliases for LOC102724710 Gene

Subcategory (RNA class) for LOC102724710 Gene

ncRNA

Quality Score for this RNA gene is

13

Aliases for LOC102724710 Gene

  • Uncharacterized LOC102724710 3

External Ids for LOC102724710 Gene

Previous GeneCards Identifiers for LOC102724710 Gene

  • GC08M092460

Summaries for LOC102724710 Gene

GeneCards Summary for LOC102724710 Gene

LOC102724710 (Uncharacterized LOC102724710) is an RNA Gene, and is affiliated with the ncRNA class.

Additional gene information for LOC102724710 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for LOC102724710 Gene

Genomics for LOC102724710 Gene

GeneHancer (GH) Regulatory Elements for LOC102724710 Gene

Promoters and enhancers for LOC102724710 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH08J092646 Enhancer 1.1 UCNEbase Ensembl ENCODE 0.4 +7.5 7525 3.1 POLR2A NR2F2 RAD21 JUND ENSG00000253634 LOC102724710 LOC105375639
GH08J092651 Enhancer 0.6 Ensembl 0.7 +3.5 3493 0.4 PRDM10 OSR2 ATF2 ZNF580 ZNF189 WT1 FEZF1 ZNF398 ZNF843 PRDM6 LOC102724710 ENSG00000253634 LOC105375639
GH08J092607 Enhancer 1.2 Ensembl ENCODE dbSUPER 0.3 +47.5 47521 1.2 CBFA2T2 ZNF148 TRIM24 EGR1 SMARCA4 CREB1 DPF2 IKZF1 ATF1 PKNOX1 ENSG00000253634 LOC102724710 LOC105375639
GH08J092611 Enhancer 1 UCNEbase Ensembl dbSUPER 0.3 +43.8 43821 1.9 ZIC2 POLR2A TRIQK LOC102724710 ENSG00000253634 LOC105375639
GH08J092642 Enhancer 0.6 UCNEbase ENCODE 0.4 +12.7 12654 1.1 LOC102724710 ENSG00000253634 LOC105375639
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LOC102724710 on UCSC Golden Path with GeneCards custom track

Genomic Locations for LOC102724710 Gene

Genomic Locations for LOC102724710 Gene
chr8:92,565,443-92,655,494
(GRCh38/hg38)
Size:
90,052 bases
Orientation:
Minus strand

Genomic View for LOC102724710 Gene

Genes around LOC102724710 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC102724710 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC102724710 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC102724710 Gene

Proteins for LOC102724710 Gene

Post-translational modifications for LOC102724710 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC102724710 Gene

Domains & Families for LOC102724710 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for LOC102724710 Gene

Function for LOC102724710 Gene

Phenotypes From GWAS Catalog for LOC102724710 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC102724710 Gene

Localization for LOC102724710 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC102724710 Gene

Pathways & Interactions for LOC102724710 Gene

PathCards logo

SuperPathways for LOC102724710 Gene

No Data Available

Interacting Proteins for LOC102724710 Gene

Gene Ontology (GO) - Biological Process for LOC102724710 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for LOC102724710 Gene

Drugs & Compounds for LOC102724710 Gene

No Compound Related Data Available

Transcripts for LOC102724710 Gene

mRNA/cDNA for LOC102724710 Gene

(1) Additional mRNA sequences :
(1) RNA Central transcripts :

Alternative Splicing Database (ASD) splice patterns (SP) for LOC102724710 Gene

No ASD Table

Relevant External Links for LOC102724710 Gene

GeneLoc Exon Structure for
LOC102724710

Expression for LOC102724710 Gene

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC102724710 Gene

Orthologs for LOC102724710 Gene

No data available for Orthologs and Evolution for LOC102724710 Gene

Paralogs for LOC102724710 Gene

No data available for Paralogs for LOC102724710 Gene

Variants for LOC102724710 Gene

Sequence variations from dbSNP and Humsavar for LOC102724710 Gene

SNP ID Clin Chr 08 pos Variation AA Info Type
rs1000020443 -- 92,651,064(-) C/T intron_variant
rs1000035690 -- 92,582,127(-) G/A intron_variant
rs1000074538 -- 92,651,465(-) C/A intron_variant
rs1000111731 -- 92,586,618(-) A/G intron_variant
rs1000142022 -- 92,585,449(-) G/A intron_variant

Structural Variations from Database of Genomic Variants (DGV) for LOC102724710 Gene

Variant ID Type Subtype PubMed ID
esv2340092 CNV deletion 18987734
esv2737303 CNV deletion 23290073
esv2737304 CNV deletion 23290073
esv2759630 CNV loss 17122850
nsv1022473 CNV loss 25217958
nsv1132159 CNV deletion 24896259
nsv396166 CNV deletion 16902084
nsv478108 CNV novel sequence insertion 20440878
nsv520319 CNV gain 19592680
nsv524263 CNV loss 19592680
nsv831395 CNV gain 17160897
nsv8367 CNV loss 18304495

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Variation tolerance and Additional Variant Information for LOC102724710 Gene

Disorders for LOC102724710 Gene

No disorders were found for LOC102724710 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC102724710 Gene

Publications for LOC102724710 Gene

No publications were found for LOC102724710 Gene.

No data available for External Links for LOC102724710 Gene

Products for LOC102724710 Gene

Sources for LOC102724710 Gene

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